RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
VPS45-204ENST00000460366 A8MU10 97 aa4.02□□□□□ -1.77
VPS45-204ENST00000460366 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
VPS45-204ENST00000460366 PSPHP1O15172 72 aa3.99□□□□□ -1.77
VPS45-204ENST00000460366 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
VPS45-204ENST00000460366 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
VPS45-204ENST00000460366 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
VPS45-204ENST00000460366 KMT2DO14686 5537 aa3.97□□□□□ -1.77
VPS45-204ENST00000460366 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
VPS45-204ENST00000460366 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
VPS45-204ENST00000460366 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.79
VPS45-204ENST00000460366 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
VPS45-204ENST00000460366 A6NED7 52 aa3.88□□□□□ -1.79
VPS45-204ENST00000460366 K7ERS5 55 aa3.88□□□□□ -1.79
VPS45-204ENST00000460366 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
VPS45-204ENST00000460366 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
VPS45-204ENST00000460366 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
VPS45-204ENST00000460366 TNP1P09430 55 aa3.82□□□□□ -1.8
VPS45-204ENST00000460366 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
VPS45-204ENST00000460366 KRTAP2-1Q9BYU5 128 aa3.82□□□□□ -1.8
VPS45-204ENST00000460366 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
VPS45-204ENST00000460366 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
VPS45-204ENST00000460366 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
VPS45-204ENST00000460366 SPRR2EP22531 72 aa3.72□□□□□ -1.81
VPS45-204ENST00000460366 SPRR2BP35325 72 aa3.72□□□□□ -1.81
VPS45-204ENST00000460366 SPRR2AP35326 72 aa3.72□□□□□ -1.81
VPS45-204ENST00000460366 KRTAP19-7Q3SYF9 63 aa3.71□□□□□ -1.82
VPS45-204ENST00000460366 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
VPS45-204ENST00000460366 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
VPS45-204ENST00000460366 MT1EP04732 61 aa3.67□□□□□ -1.82
VPS45-204ENST00000460366 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
VPS45-204ENST00000460366 ROMO1P60602 79 aa3.64□□□□□ -1.83
VPS45-204ENST00000460366 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
VPS45-204ENST00000460366 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
VPS45-204ENST00000460366 SPRR2DP22532 72 aa3.59□□□□□ -1.83
VPS45-204ENST00000460366 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
VPS45-204ENST00000460366 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
VPS45-204ENST00000460366 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
VPS45-204ENST00000460366 MT1GP13640 62 aa3.56□□□□□ -1.84
VPS45-204ENST00000460366 MT1LQ93083 61 aa3.55□□□□□ -1.84
VPS45-204ENST00000460366 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
VPS45-204ENST00000460366 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
VPS45-204ENST00000460366 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
VPS45-204ENST00000460366 MT1MQ8N339 61 aa3.47□□□□□ -1.85
VPS45-204ENST00000460366 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
VPS45-204ENST00000460366 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
VPS45-204ENST00000460366 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
VPS45-204ENST00000460366 SPRR5A0A1B0GTR4 108 aa3.4□□□□□ -1.87
VPS45-204ENST00000460366 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
VPS45-204ENST00000460366 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
VPS45-204ENST00000460366 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
VPS45-204ENST00000460366 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
VPS45-204ENST00000460366 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
VPS45-204ENST00000460366 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
VPS45-204ENST00000460366 KTN1-AS1Q86SY8 53 aa3.14□□□□□ -1.91
VPS45-204ENST00000460366 MT4P47944 62 aa3.1□□□□□ -1.91
VPS45-204ENST00000460366 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
VPS45-204ENST00000460366 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
VPS45-204ENST00000460366 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
VPS45-204ENST00000460366 MT1AP04731 61 aa3.03□□□□□ -1.92
VPS45-204ENST00000460366 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
VPS45-204ENST00000460366 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
VPS45-204ENST00000460366 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
VPS45-204ENST00000460366 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
VPS45-204ENST00000460366 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
VPS45-204ENST00000460366 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
VPS45-204ENST00000460366 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
VPS45-204ENST00000460366 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
VPS45-204ENST00000460366 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
VPS45-204ENST00000460366 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
VPS45-204ENST00000460366 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
VPS45-204ENST00000460366 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
VPS45-204ENST00000460366 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
VPS45-204ENST00000460366 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
VPS45-204ENST00000460366 INE1O15225 51 aa1.97□□□□□ -2.09
VPS45-204ENST00000460366 PRM1P04553 51 aa1.85□□□□□ -2.11
VPS45-204ENST00000460366 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
VPS45-204ENST00000460366 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 109.6 ms