RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
NUDCD3-203ENST00000460110 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
NUDCD3-203ENST00000460110 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
NUDCD3-203ENST00000460110 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
NUDCD3-203ENST00000460110 MT1EP04732 61 aa3.29□□□□□ -1.88
NUDCD3-203ENST00000460110 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
NUDCD3-203ENST00000460110 MT1LQ93083 61 aa3.26□□□□□ -1.89
NUDCD3-203ENST00000460110 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
NUDCD3-203ENST00000460110 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
NUDCD3-203ENST00000460110 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
NUDCD3-203ENST00000460110 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
NUDCD3-203ENST00000460110 MT1GP13640 62 aa3.18□□□□□ -1.9
NUDCD3-203ENST00000460110 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
NUDCD3-203ENST00000460110 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
NUDCD3-203ENST00000460110 MT1MQ8N339 61 aa3.12□□□□□ -1.91
NUDCD3-203ENST00000460110 SPRR2EP22531 72 aa3.1□□□□□ -1.91
NUDCD3-203ENST00000460110 SPRR2BP35325 72 aa3.1□□□□□ -1.91
NUDCD3-203ENST00000460110 SPRR2AP35326 72 aa3.1□□□□□ -1.91
NUDCD3-203ENST00000460110 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
NUDCD3-203ENST00000460110 LCE5AQ5TCM9 118 aa3.01□□□□□ -1.93
NUDCD3-203ENST00000460110 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
NUDCD3-203ENST00000460110 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
NUDCD3-203ENST00000460110 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
NUDCD3-203ENST00000460110 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
NUDCD3-203ENST00000460110 SPRR2DP22532 72 aa2.97□□□□□ -1.93
NUDCD3-203ENST00000460110 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
NUDCD3-203ENST00000460110 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
NUDCD3-203ENST00000460110 KRTAP4-9Q9BYQ8 210 aa2.82□□□□□ -1.96
NUDCD3-203ENST00000460110 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
NUDCD3-203ENST00000460110 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
NUDCD3-203ENST00000460110 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
NUDCD3-203ENST00000460110 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
NUDCD3-203ENST00000460110 MT1AP04731 61 aa2.73□□□□□ -1.97
NUDCD3-203ENST00000460110 NEBP20929 6669 aa2.72□□□□□ -1.97
NUDCD3-203ENST00000460110 MT4P47944 62 aa2.71□□□□□ -1.98
NUDCD3-203ENST00000460110 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
NUDCD3-203ENST00000460110 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
NUDCD3-203ENST00000460110 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
NUDCD3-203ENST00000460110 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
NUDCD3-203ENST00000460110 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
NUDCD3-203ENST00000460110 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
NUDCD3-203ENST00000460110 MT3P25713 68 aa2.54□□□□□ -2
NUDCD3-203ENST00000460110 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
NUDCD3-203ENST00000460110 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
NUDCD3-203ENST00000460110 PRM1P04553 51 aa2.51□□□□□ -2.01
NUDCD3-203ENST00000460110 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
NUDCD3-203ENST00000460110 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
NUDCD3-203ENST00000460110 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.02
NUDCD3-203ENST00000460110 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
NUDCD3-203ENST00000460110 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
NUDCD3-203ENST00000460110 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
NUDCD3-203ENST00000460110 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
NUDCD3-203ENST00000460110 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
NUDCD3-203ENST00000460110 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
NUDCD3-203ENST00000460110 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
NUDCD3-203ENST00000460110 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
NUDCD3-203ENST00000460110 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
NUDCD3-203ENST00000460110 KRTAP5-10Q6L8G5 202 aa2.01□□□□□ -2.09
NUDCD3-203ENST00000460110 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
NUDCD3-203ENST00000460110 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
NUDCD3-203ENST00000460110 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
NUDCD3-203ENST00000460110 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
NUDCD3-203ENST00000460110 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
NUDCD3-203ENST00000460110 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
NUDCD3-203ENST00000460110 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
NUDCD3-203ENST00000460110 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
NUDCD3-203ENST00000460110 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
NUDCD3-203ENST00000460110 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
NUDCD3-203ENST00000460110 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
NUDCD3-203ENST00000460110 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
NUDCD3-203ENST00000460110 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 119.9 ms