RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-208ENST00000459850 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
ABCA2-208ENST00000459850 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
ABCA2-208ENST00000459850 MT1MQ8N339 61 aa3.66□□□□□ -1.82
ABCA2-208ENST00000459850 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
ABCA2-208ENST00000459850 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
ABCA2-208ENST00000459850 KRTAP19-6Q3LI70 58 aa3.62□□□□□ -1.83
ABCA2-208ENST00000459850 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
ABCA2-208ENST00000459850 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.85
ABCA2-208ENST00000459850 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
ABCA2-208ENST00000459850 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.85
ABCA2-208ENST00000459850 HERC2O95714 4834 aa3.46□□□□□ -1.86
ABCA2-208ENST00000459850 KIAA1109Q2LD37 5005 aa3.45□□□□□ -1.86
ABCA2-208ENST00000459850 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
ABCA2-208ENST00000459850 MT1AP04731 61 aa3.41□□□□□ -1.86
ABCA2-208ENST00000459850 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
ABCA2-208ENST00000459850 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
ABCA2-208ENST00000459850 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.87
ABCA2-208ENST00000459850 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.87
ABCA2-208ENST00000459850 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
ABCA2-208ENST00000459850 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
ABCA2-208ENST00000459850 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
ABCA2-208ENST00000459850 BIRC6Q9NR09 4857 aa3.33□□□□□ -1.88
ABCA2-208ENST00000459850 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
ABCA2-208ENST00000459850 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
ABCA2-208ENST00000459850 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
ABCA2-208ENST00000459850 HMCN2Q8NDA2 5059 aa3.21□□□□□ -1.9
ABCA2-208ENST00000459850 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
ABCA2-208ENST00000459850 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
ABCA2-208ENST00000459850 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
ABCA2-208ENST00000459850 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
ABCA2-208ENST00000459850 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.92
ABCA2-208ENST00000459850 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
ABCA2-208ENST00000459850 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
ABCA2-208ENST00000459850 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
ABCA2-208ENST00000459850 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.93
ABCA2-208ENST00000459850 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.94
ABCA2-208ENST00000459850 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
ABCA2-208ENST00000459850 RNF213Q63HN8 5207 aa2.91□□□□□ -1.94
ABCA2-208ENST00000459850 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
ABCA2-208ENST00000459850 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
ABCA2-208ENST00000459850 MUC2Q02817 5179 aa2.79□□□□□ -1.96
ABCA2-208ENST00000459850 UBR4Q5T4S7 5183 aa2.76□□□□□ -1.97
ABCA2-208ENST00000459850 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
ABCA2-208ENST00000459850 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
ABCA2-208ENST00000459850 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
ABCA2-208ENST00000459850 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
ABCA2-208ENST00000459850 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
ABCA2-208ENST00000459850 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
ABCA2-208ENST00000459850 KMT2DO14686 5537 aa2.54□□□□□ -2
ABCA2-208ENST00000459850 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
ABCA2-208ENST00000459850 NEBP20929 6669 aa2.47□□□□□ -2.01
ABCA2-208ENST00000459850 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
ABCA2-208ENST00000459850 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
ABCA2-208ENST00000459850 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
ABCA2-208ENST00000459850 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.04
ABCA2-208ENST00000459850 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
ABCA2-208ENST00000459850 USH2AO75445 5202 aa2.29□□□□□ -2.04
ABCA2-208ENST00000459850 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
ABCA2-208ENST00000459850 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
ABCA2-208ENST00000459850 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
ABCA2-208ENST00000459850 MDN1Q9NU22 5596 aa2.13□□□□□ -2.07
ABCA2-208ENST00000459850 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
ABCA2-208ENST00000459850 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.08
ABCA2-208ENST00000459850 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
ABCA2-208ENST00000459850 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
ABCA2-208ENST00000459850 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
ABCA2-208ENST00000459850 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
ABCA2-208ENST00000459850 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
ABCA2-208ENST00000459850 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
ABCA2-208ENST00000459850 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
ABCA2-208ENST00000459850 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
ABCA2-208ENST00000459850 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
ABCA2-208ENST00000459850 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
ABCA2-208ENST00000459850 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
ABCA2-208ENST00000459850 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
ABCA2-208ENST00000459850 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
ABCA2-208ENST00000459850 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
ABCA2-208ENST00000459850 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms