RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
CRAT-207ENST00000458362 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
CRAT-207ENST00000458362 LCE2DQ5TA82 110 aaPredicted RBP6.84□□□□□ -1.31
CRAT-207ENST00000458362 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
CRAT-207ENST00000458362 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
CRAT-207ENST00000458362 MT1MQ8N339 61 aa6.71□□□□□ -1.33
CRAT-207ENST00000458362 MT1GP13640 62 aa6.71□□□□□ -1.34
CRAT-207ENST00000458362 KRTAP19-3Q7Z4W3 81 aa6.7□□□□□ -1.34
CRAT-207ENST00000458362 MUC12Q9UKN1 5478 aa6.69□□□□□ -1.34
CRAT-207ENST00000458362 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
CRAT-207ENST00000458362 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
CRAT-207ENST00000458362 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
CRAT-207ENST00000458362 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
CRAT-207ENST00000458362 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.38
CRAT-207ENST00000458362 DSTQ03001 7570 aaKnown RBP6.32□□□□□ -1.4
CRAT-207ENST00000458362 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
CRAT-207ENST00000458362 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
CRAT-207ENST00000458362 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
CRAT-207ENST00000458362 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
CRAT-207ENST00000458362 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
CRAT-207ENST00000458362 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
CRAT-207ENST00000458362 MDN1Q9NU22 5596 aa6.1□□□□□ -1.43
CRAT-207ENST00000458362 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.44
CRAT-207ENST00000458362 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
CRAT-207ENST00000458362 MT1AP04731 61 aa6.02□□□□□ -1.45
CRAT-207ENST00000458362 KRTAP5-5Q701N2 237 aaPredicted RBP5.96□□□□□ -1.46
CRAT-207ENST00000458362 SPRR2EP22531 72 aa5.89□□□□□ -1.47
CRAT-207ENST00000458362 SPRR2BP35325 72 aa5.89□□□□□ -1.47
CRAT-207ENST00000458362 SPRR2AP35326 72 aa5.89□□□□□ -1.47
CRAT-207ENST00000458362 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
CRAT-207ENST00000458362 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
CRAT-207ENST00000458362 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
CRAT-207ENST00000458362 LCE3EQ5T5B0 92 aa5.72□□□□□ -1.49
CRAT-207ENST00000458362 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
CRAT-207ENST00000458362 KRTAP9-7A8MTY7 169 aa5.63□□□□□ -1.51
CRAT-207ENST00000458362 SPRR2DP22532 72 aa5.63□□□□□ -1.51
CRAT-207ENST00000458362 KRTAP6-3Q3LI67 103 aa5.62□□□□□ -1.51
CRAT-207ENST00000458362 PRM1P04553 51 aa5.48□□□□□ -1.53
CRAT-207ENST00000458362 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
CRAT-207ENST00000458362 MT3P25713 68 aa5.39□□□□□ -1.55
CRAT-207ENST00000458362 NEBP20929 6669 aa5.37□□□□□ -1.55
CRAT-207ENST00000458362 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CRAT-207ENST00000458362 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
CRAT-207ENST00000458362 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
CRAT-207ENST00000458362 MT4P47944 62 aa4.98□□□□□ -1.61
CRAT-207ENST00000458362 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CRAT-207ENST00000458362 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
CRAT-207ENST00000458362 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CRAT-207ENST00000458362 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
CRAT-207ENST00000458362 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
CRAT-207ENST00000458362 HMCN1Q96RW7 5635 aa4.79□□□□□ -1.64
CRAT-207ENST00000458362 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
CRAT-207ENST00000458362 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
CRAT-207ENST00000458362 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
CRAT-207ENST00000458362 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
CRAT-207ENST00000458362 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
CRAT-207ENST00000458362 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
CRAT-207ENST00000458362 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
CRAT-207ENST00000458362 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
CRAT-207ENST00000458362 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
CRAT-207ENST00000458362 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
CRAT-207ENST00000458362 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CRAT-207ENST00000458362 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
CRAT-207ENST00000458362 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
CRAT-207ENST00000458362 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CRAT-207ENST00000458362 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
CRAT-207ENST00000458362 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
CRAT-207ENST00000458362 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CRAT-207ENST00000458362 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
CRAT-207ENST00000458362 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CRAT-207ENST00000458362 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
CRAT-207ENST00000458362 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CRAT-207ENST00000458362 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
CRAT-207ENST00000458362 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
CRAT-207ENST00000458362 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
CRAT-207ENST00000458362 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
CRAT-207ENST00000458362 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CRAT-207ENST00000458362 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 732.3 ms