RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
KCNMA1-216ENST00000457953 SYNE2Q8WXH0 6885 aaKnown RBP4.5□□□□□ -1.69
KCNMA1-216ENST00000457953 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
KCNMA1-216ENST00000457953 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
KCNMA1-216ENST00000457953 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
KCNMA1-216ENST00000457953 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
KCNMA1-216ENST00000457953 MUC12Q9UKN1 5478 aa4.43□□□□□ -1.7
KCNMA1-216ENST00000457953 MT1LQ93083 61 aa4.42□□□□□ -1.7
KCNMA1-216ENST00000457953 MT1EP04732 61 aa4.42□□□□□ -1.7
KCNMA1-216ENST00000457953 SPRR2EP22531 72 aa4.42□□□□□ -1.7
KCNMA1-216ENST00000457953 SPRR2BP35325 72 aa4.42□□□□□ -1.7
KCNMA1-216ENST00000457953 SPRR2AP35326 72 aa4.42□□□□□ -1.7
KCNMA1-216ENST00000457953 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
KCNMA1-216ENST00000457953 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
KCNMA1-216ENST00000457953 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
KCNMA1-216ENST00000457953 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
KCNMA1-216ENST00000457953 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
KCNMA1-216ENST00000457953 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
KCNMA1-216ENST00000457953 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
KCNMA1-216ENST00000457953 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
KCNMA1-216ENST00000457953 MT1MQ8N339 61 aa4.23□□□□□ -1.73
KCNMA1-216ENST00000457953 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
KCNMA1-216ENST00000457953 SPRR2DP22532 72 aa4.22□□□□□ -1.73
KCNMA1-216ENST00000457953 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.73
KCNMA1-216ENST00000457953 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
KCNMA1-216ENST00000457953 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
KCNMA1-216ENST00000457953 PRM1P04553 51 aa4.17□□□□□ -1.74
KCNMA1-216ENST00000457953 MT4P47944 62 aa3.94□□□□□ -1.78
KCNMA1-216ENST00000457953 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
KCNMA1-216ENST00000457953 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
KCNMA1-216ENST00000457953 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
KCNMA1-216ENST00000457953 MT3P25713 68 aa3.83□□□□□ -1.8
KCNMA1-216ENST00000457953 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
KCNMA1-216ENST00000457953 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
KCNMA1-216ENST00000457953 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
KCNMA1-216ENST00000457953 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
KCNMA1-216ENST00000457953 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
KCNMA1-216ENST00000457953 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.76□□□□□ -1.81
KCNMA1-216ENST00000457953 MT1AP04731 61 aa3.75□□□□□ -1.81
KCNMA1-216ENST00000457953 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
KCNMA1-216ENST00000457953 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
KCNMA1-216ENST00000457953 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
KCNMA1-216ENST00000457953 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
KCNMA1-216ENST00000457953 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
KCNMA1-216ENST00000457953 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
KCNMA1-216ENST00000457953 NEBP20929 6669 aa3.44□□□□□ -1.86
KCNMA1-216ENST00000457953 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
KCNMA1-216ENST00000457953 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
KCNMA1-216ENST00000457953 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
KCNMA1-216ENST00000457953 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
KCNMA1-216ENST00000457953 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
KCNMA1-216ENST00000457953 MUC5ACP98088 5654 aa3.15□□□□□ -1.9
KCNMA1-216ENST00000457953 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
KCNMA1-216ENST00000457953 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
KCNMA1-216ENST00000457953 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
KCNMA1-216ENST00000457953 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
KCNMA1-216ENST00000457953 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
KCNMA1-216ENST00000457953 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
KCNMA1-216ENST00000457953 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
KCNMA1-216ENST00000457953 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
KCNMA1-216ENST00000457953 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
KCNMA1-216ENST00000457953 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
KCNMA1-216ENST00000457953 KRTAP5-3Q6L8H2 238 aa2.75□□□□□ -1.97
KCNMA1-216ENST00000457953 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
KCNMA1-216ENST00000457953 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
KCNMA1-216ENST00000457953 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
KCNMA1-216ENST00000457953 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
KCNMA1-216ENST00000457953 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
KCNMA1-216ENST00000457953 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
KCNMA1-216ENST00000457953 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
KCNMA1-216ENST00000457953 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
KCNMA1-216ENST00000457953 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
KCNMA1-216ENST00000457953 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
KCNMA1-216ENST00000457953 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
KCNMA1-216ENST00000457953 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
KCNMA1-216ENST00000457953 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
KCNMA1-216ENST00000457953 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 84.7 ms