RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SMARCAD1-204ENST00000457823 MT1EP04732 61 aa3.82□□□□□ -1.8
SMARCAD1-204ENST00000457823 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
SMARCAD1-204ENST00000457823 USH2AO75445 5202 aa3.76□□□□□ -1.81
SMARCAD1-204ENST00000457823 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SMARCAD1-204ENST00000457823 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
SMARCAD1-204ENST00000457823 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
SMARCAD1-204ENST00000457823 KMT2DO14686 5537 aa3.67□□□□□ -1.82
SMARCAD1-204ENST00000457823 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.82
SMARCAD1-204ENST00000457823 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
SMARCAD1-204ENST00000457823 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.83
SMARCAD1-204ENST00000457823 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
SMARCAD1-204ENST00000457823 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
SMARCAD1-204ENST00000457823 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
SMARCAD1-204ENST00000457823 MT3P25713 68 aa3.58□□□□□ -1.84
SMARCAD1-204ENST00000457823 MT4P47944 62 aa3.56□□□□□ -1.84
SMARCAD1-204ENST00000457823 PRM1P04553 51 aa3.46□□□□□ -1.86
SMARCAD1-204ENST00000457823 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
SMARCAD1-204ENST00000457823 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
SMARCAD1-204ENST00000457823 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
SMARCAD1-204ENST00000457823 MT1AP04731 61 aa3.42□□□□□ -1.86
SMARCAD1-204ENST00000457823 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SMARCAD1-204ENST00000457823 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
SMARCAD1-204ENST00000457823 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
SMARCAD1-204ENST00000457823 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
SMARCAD1-204ENST00000457823 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
SMARCAD1-204ENST00000457823 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
SMARCAD1-204ENST00000457823 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
SMARCAD1-204ENST00000457823 KRTAP9-6A0A140TA67 174 aa3.35□□□□□ -1.87
SMARCAD1-204ENST00000457823 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
SMARCAD1-204ENST00000457823 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
SMARCAD1-204ENST00000457823 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
SMARCAD1-204ENST00000457823 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SMARCAD1-204ENST00000457823 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
SMARCAD1-204ENST00000457823 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
SMARCAD1-204ENST00000457823 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
SMARCAD1-204ENST00000457823 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SMARCAD1-204ENST00000457823 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
SMARCAD1-204ENST00000457823 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.9
SMARCAD1-204ENST00000457823 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
SMARCAD1-204ENST00000457823 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
SMARCAD1-204ENST00000457823 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
SMARCAD1-204ENST00000457823 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SMARCAD1-204ENST00000457823 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
SMARCAD1-204ENST00000457823 MDN1Q9NU22 5596 aa3□□□□□ -1.93
SMARCAD1-204ENST00000457823 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
SMARCAD1-204ENST00000457823 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
SMARCAD1-204ENST00000457823 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
SMARCAD1-204ENST00000457823 NEBP20929 6669 aa2.81□□□□□ -1.96
SMARCAD1-204ENST00000457823 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
SMARCAD1-204ENST00000457823 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SMARCAD1-204ENST00000457823 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
SMARCAD1-204ENST00000457823 KRTAP20-2Q3LI61 65 aa2.63□□□□□ -1.99
SMARCAD1-204ENST00000457823 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
SMARCAD1-204ENST00000457823 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -2
SMARCAD1-204ENST00000457823 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
SMARCAD1-204ENST00000457823 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
SMARCAD1-204ENST00000457823 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
SMARCAD1-204ENST00000457823 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
SMARCAD1-204ENST00000457823 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SMARCAD1-204ENST00000457823 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
SMARCAD1-204ENST00000457823 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
SMARCAD1-204ENST00000457823 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
SMARCAD1-204ENST00000457823 KRTAP5-3Q6L8H2 238 aa2.16□□□□□ -2.06
SMARCAD1-204ENST00000457823 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
SMARCAD1-204ENST00000457823 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
SMARCAD1-204ENST00000457823 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
SMARCAD1-204ENST00000457823 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SMARCAD1-204ENST00000457823 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
SMARCAD1-204ENST00000457823 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
SMARCAD1-204ENST00000457823 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
SMARCAD1-204ENST00000457823 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
SMARCAD1-204ENST00000457823 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
SMARCAD1-204ENST00000457823 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
SMARCAD1-204ENST00000457823 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
SMARCAD1-204ENST00000457823 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SMARCAD1-204ENST00000457823 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 66.1 ms