RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
LINC01250-201ENST00000457478 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
LINC01250-201ENST00000457478 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
LINC01250-201ENST00000457478 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
LINC01250-201ENST00000457478 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
LINC01250-201ENST00000457478 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
LINC01250-201ENST00000457478 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
LINC01250-201ENST00000457478 KMT2DO14686 5537 aa4.9□□□□□ -1.62
LINC01250-201ENST00000457478 KRTAP12-4P60329 112 aa4.9□□□□□ -1.62
LINC01250-201ENST00000457478 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.63
LINC01250-201ENST00000457478 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
LINC01250-201ENST00000457478 NEBP20929 6669 aa4.79□□□□□ -1.64
LINC01250-201ENST00000457478 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
LINC01250-201ENST00000457478 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
LINC01250-201ENST00000457478 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
LINC01250-201ENST00000457478 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
LINC01250-201ENST00000457478 KRTAP4-7Q9BYR0 210 aa4.74□□□□□ -1.65
LINC01250-201ENST00000457478 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
LINC01250-201ENST00000457478 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
LINC01250-201ENST00000457478 SPRR2EP22531 72 aa4.69□□□□□ -1.66
LINC01250-201ENST00000457478 SPRR2BP35325 72 aa4.69□□□□□ -1.66
LINC01250-201ENST00000457478 SPRR2AP35326 72 aa4.69□□□□□ -1.66
LINC01250-201ENST00000457478 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
LINC01250-201ENST00000457478 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
LINC01250-201ENST00000457478 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
LINC01250-201ENST00000457478 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
LINC01250-201ENST00000457478 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
LINC01250-201ENST00000457478 MT1LQ93083 61 aa4.57□□□□□ -1.68
LINC01250-201ENST00000457478 SPRR2DP22532 72 aa4.53□□□□□ -1.68
LINC01250-201ENST00000457478 MT1EP04732 61 aa4.49□□□□□ -1.69
LINC01250-201ENST00000457478 PRM1P04553 51 aa4.45□□□□□ -1.7
LINC01250-201ENST00000457478 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
LINC01250-201ENST00000457478 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
LINC01250-201ENST00000457478 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
LINC01250-201ENST00000457478 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
LINC01250-201ENST00000457478 MT1AP04731 61 aa4.35□□□□□ -1.71
LINC01250-201ENST00000457478 MT1GP13640 62 aa4.29□□□□□ -1.72
LINC01250-201ENST00000457478 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
LINC01250-201ENST00000457478 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
LINC01250-201ENST00000457478 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
LINC01250-201ENST00000457478 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
LINC01250-201ENST00000457478 MT1MQ8N339 61 aa4.21□□□□□ -1.74
LINC01250-201ENST00000457478 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
LINC01250-201ENST00000457478 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
LINC01250-201ENST00000457478 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
LINC01250-201ENST00000457478 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
LINC01250-201ENST00000457478 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
LINC01250-201ENST00000457478 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
LINC01250-201ENST00000457478 MT4P47944 62 aa3.96□□□□□ -1.77
LINC01250-201ENST00000457478 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
LINC01250-201ENST00000457478 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
LINC01250-201ENST00000457478 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
LINC01250-201ENST00000457478 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
LINC01250-201ENST00000457478 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
LINC01250-201ENST00000457478 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
LINC01250-201ENST00000457478 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
LINC01250-201ENST00000457478 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
LINC01250-201ENST00000457478 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
LINC01250-201ENST00000457478 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.84
LINC01250-201ENST00000457478 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
LINC01250-201ENST00000457478 MT3P25713 68 aa3.45□□□□□ -1.86
LINC01250-201ENST00000457478 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
LINC01250-201ENST00000457478 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
LINC01250-201ENST00000457478 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.92
LINC01250-201ENST00000457478 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
LINC01250-201ENST00000457478 MUC5ACP98088 5654 aa3□□□□□ -1.93
LINC01250-201ENST00000457478 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
LINC01250-201ENST00000457478 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
LINC01250-201ENST00000457478 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
LINC01250-201ENST00000457478 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
LINC01250-201ENST00000457478 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
LINC01250-201ENST00000457478 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
LINC01250-201ENST00000457478 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
LINC01250-201ENST00000457478 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
LINC01250-201ENST00000457478 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
LINC01250-201ENST00000457478 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
LINC01250-201ENST00000457478 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms