RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
CUBNP3-201ENST00000457461 MT1XP80297 61 aa2.66□□□□□ -1.98
CUBNP3-201ENST00000457461 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
CUBNP3-201ENST00000457461 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
CUBNP3-201ENST00000457461 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
CUBNP3-201ENST00000457461 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
CUBNP3-201ENST00000457461 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -2
CUBNP3-201ENST00000457461 LCE1FQ5T754 118 aa2.55□□□□□ -2
CUBNP3-201ENST00000457461 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
CUBNP3-201ENST00000457461 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
CUBNP3-201ENST00000457461 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
CUBNP3-201ENST00000457461 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CUBNP3-201ENST00000457461 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
CUBNP3-201ENST00000457461 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
CUBNP3-201ENST00000457461 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
CUBNP3-201ENST00000457461 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
CUBNP3-201ENST00000457461 KMT2DO14686 5537 aa2.45□□□□□ -2.02
CUBNP3-201ENST00000457461 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
CUBNP3-201ENST00000457461 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
CUBNP3-201ENST00000457461 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CUBNP3-201ENST00000457461 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
CUBNP3-201ENST00000457461 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
CUBNP3-201ENST00000457461 MT1EP04732 61 aa2.33□□□□□ -2.04
CUBNP3-201ENST00000457461 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
CUBNP3-201ENST00000457461 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CUBNP3-201ENST00000457461 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CUBNP3-201ENST00000457461 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
CUBNP3-201ENST00000457461 MT1LQ93083 61 aa2.28□□□□□ -2.04
CUBNP3-201ENST00000457461 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
CUBNP3-201ENST00000457461 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
CUBNP3-201ENST00000457461 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
CUBNP3-201ENST00000457461 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
CUBNP3-201ENST00000457461 MT1GP13640 62 aa2.21□□□□□ -2.06
CUBNP3-201ENST00000457461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
CUBNP3-201ENST00000457461 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.06
CUBNP3-201ENST00000457461 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CUBNP3-201ENST00000457461 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
CUBNP3-201ENST00000457461 MT1MQ8N339 61 aa2.19□□□□□ -2.06
CUBNP3-201ENST00000457461 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
CUBNP3-201ENST00000457461 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
CUBNP3-201ENST00000457461 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
CUBNP3-201ENST00000457461 SPRR2EP22531 72 aa2.13□□□□□ -2.07
CUBNP3-201ENST00000457461 SPRR2BP35325 72 aa2.13□□□□□ -2.07
CUBNP3-201ENST00000457461 SPRR2AP35326 72 aa2.13□□□□□ -2.07
CUBNP3-201ENST00000457461 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
CUBNP3-201ENST00000457461 MT1AP04731 61 aa2.07□□□□□ -2.08
CUBNP3-201ENST00000457461 SPRR2DP22532 72 aa2.05□□□□□ -2.08
CUBNP3-201ENST00000457461 NEBP20929 6669 aa2.05□□□□□ -2.08
CUBNP3-201ENST00000457461 KRTAP20-1Q3LI63 56 aa2.05□□□□□ -2.08
CUBNP3-201ENST00000457461 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
CUBNP3-201ENST00000457461 PRM1P04553 51 aa2.03□□□□□ -2.09
CUBNP3-201ENST00000457461 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
CUBNP3-201ENST00000457461 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CUBNP3-201ENST00000457461 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
CUBNP3-201ENST00000457461 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.1
CUBNP3-201ENST00000457461 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
CUBNP3-201ENST00000457461 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
CUBNP3-201ENST00000457461 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
CUBNP3-201ENST00000457461 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
CUBNP3-201ENST00000457461 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
CUBNP3-201ENST00000457461 MT4P47944 62 aa1.77□□□□□ -2.13
CUBNP3-201ENST00000457461 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
CUBNP3-201ENST00000457461 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
CUBNP3-201ENST00000457461 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CUBNP3-201ENST00000457461 OBSCNQ5VST9 7968 aa1.6□□□□□ -2.15
CUBNP3-201ENST00000457461 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.16
CUBNP3-201ENST00000457461 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
CUBNP3-201ENST00000457461 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
CUBNP3-201ENST00000457461 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
CUBNP3-201ENST00000457461 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
CUBNP3-201ENST00000457461 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
CUBNP3-201ENST00000457461 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
CUBNP3-201ENST00000457461 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CUBNP3-201ENST00000457461 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CUBNP3-201ENST00000457461 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
CUBNP3-201ENST00000457461 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
CUBNP3-201ENST00000457461 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 146.3 ms