RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 CRCT1Q9UGL9 99 aa7.13□□□□□ -1.27
TMED4-203ENST00000457408 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
TMED4-203ENST00000457408 SPRR2FQ96RM1 72 aa7.06□□□□□ -1.28
TMED4-203ENST00000457408 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.28
TMED4-203ENST00000457408 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
TMED4-203ENST00000457408 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
TMED4-203ENST00000457408 KRTAP4-3Q9BYR4 195 aa6.95□□□□□ -1.3
TMED4-203ENST00000457408 MT1GP13640 62 aa6.89□□□□□ -1.31
TMED4-203ENST00000457408 MT1MQ8N339 61 aa6.88□□□□□ -1.31
TMED4-203ENST00000457408 MDN1Q9NU22 5596 aa6.83□□□□□ -1.32
TMED4-203ENST00000457408 DSTQ03001 7570 aaKnown RBP6.81□□□□□ -1.32
TMED4-203ENST00000457408 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
TMED4-203ENST00000457408 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
TMED4-203ENST00000457408 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
TMED4-203ENST00000457408 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
TMED4-203ENST00000457408 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
TMED4-203ENST00000457408 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
TMED4-203ENST00000457408 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
TMED4-203ENST00000457408 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
TMED4-203ENST00000457408 SPRR2EP22531 72 aa6.59□□□□□ -1.36
TMED4-203ENST00000457408 SPRR2BP35325 72 aa6.59□□□□□ -1.36
TMED4-203ENST00000457408 SPRR2AP35326 72 aa6.59□□□□□ -1.36
TMED4-203ENST00000457408 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
TMED4-203ENST00000457408 KRTAP6-3Q3LI67 103 aa6.43□□□□□ -1.38
TMED4-203ENST00000457408 SPRR2DP22532 72 aa6.32□□□□□ -1.4
TMED4-203ENST00000457408 KRTAP6-1Q3LI64 71 aa6.14□□□□□ -1.43
TMED4-203ENST00000457408 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
TMED4-203ENST00000457408 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
TMED4-203ENST00000457408 SYNE1Q8NF91 8797 aaKnown RBP6.1□□□□□ -1.43
TMED4-203ENST00000457408 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
TMED4-203ENST00000457408 MT1AP04731 61 aa6.07□□□□□ -1.44
TMED4-203ENST00000457408 NEBP20929 6669 aa6.04□□□□□ -1.44
TMED4-203ENST00000457408 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
TMED4-203ENST00000457408 KRTAP12-4P60329 112 aa5.89□□□□□ -1.47
TMED4-203ENST00000457408 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
TMED4-203ENST00000457408 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
TMED4-203ENST00000457408 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
TMED4-203ENST00000457408 MT4P47944 62 aa5.59□□□□□ -1.51
TMED4-203ENST00000457408 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
TMED4-203ENST00000457408 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
TMED4-203ENST00000457408 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
TMED4-203ENST00000457408 MT3P25713 68 aa5.51□□□□□ -1.53
TMED4-203ENST00000457408 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
TMED4-203ENST00000457408 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
TMED4-203ENST00000457408 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
TMED4-203ENST00000457408 KRTAP20-1Q3LI63 56 aa5.42□□□□□ -1.54
TMED4-203ENST00000457408 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
TMED4-203ENST00000457408 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
TMED4-203ENST00000457408 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
TMED4-203ENST00000457408 PRM1P04553 51 aa5.25□□□□□ -1.57
TMED4-203ENST00000457408 KRTAP5-2Q701N4 177 aa5.15□□□□□ -1.59
TMED4-203ENST00000457408 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
TMED4-203ENST00000457408 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
TMED4-203ENST00000457408 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
TMED4-203ENST00000457408 MUC5ACP98088 5654 aa4.58□□□□□ -1.68
TMED4-203ENST00000457408 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
TMED4-203ENST00000457408 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
TMED4-203ENST00000457408 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
TMED4-203ENST00000457408 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
TMED4-203ENST00000457408 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
TMED4-203ENST00000457408 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
TMED4-203ENST00000457408 LCE1CQ5T751 118 aa4.34□□□□□ -1.72
TMED4-203ENST00000457408 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
TMED4-203ENST00000457408 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.74
TMED4-203ENST00000457408 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TMED4-203ENST00000457408 GPR98Q8WXG9 6306 aa3.99□□□□□ -1.77
TMED4-203ENST00000457408 MUC5BQ9HC84 5762 aaPredicted RBP3.98□□□□□ -1.77
TMED4-203ENST00000457408 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
TMED4-203ENST00000457408 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
TMED4-203ENST00000457408 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TMED4-203ENST00000457408 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
TMED4-203ENST00000457408 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
TMED4-203ENST00000457408 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
TMED4-203ENST00000457408 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
TMED4-203ENST00000457408 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
TMED4-203ENST00000457408 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
TMED4-203ENST00000457408 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 68.1 ms