RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
RFX3-210ENST00000457373 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
RFX3-210ENST00000457373 NEBP20929 6669 aa3.92□□□□□ -1.78
RFX3-210ENST00000457373 UQCR11O14957 56 aa3.91□□□□□ -1.78
RFX3-210ENST00000457373 SPRR2EP22531 72 aa3.91□□□□□ -1.78
RFX3-210ENST00000457373 SPRR2BP35325 72 aa3.91□□□□□ -1.78
RFX3-210ENST00000457373 SPRR2AP35326 72 aa3.91□□□□□ -1.78
RFX3-210ENST00000457373 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
RFX3-210ENST00000457373 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
RFX3-210ENST00000457373 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
RFX3-210ENST00000457373 Q1T7F1 81 aa3.84□□□□□ -1.79
RFX3-210ENST00000457373 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
RFX3-210ENST00000457373 C10orf95Q9H7T3 257 aa3.83□□□□□ -1.8
RFX3-210ENST00000457373 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
RFX3-210ENST00000457373 TNP1P09430 55 aa3.79□□□□□ -1.8
RFX3-210ENST00000457373 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
RFX3-210ENST00000457373 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
RFX3-210ENST00000457373 SPRR2DP22532 72 aa3.77□□□□□ -1.81
RFX3-210ENST00000457373 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
RFX3-210ENST00000457373 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
RFX3-210ENST00000457373 K7ERS5 55 aa3.74□□□□□ -1.81
RFX3-210ENST00000457373 MT1EP04732 61 aa3.73□□□□□ -1.81
RFX3-210ENST00000457373 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
RFX3-210ENST00000457373 A6NED7 52 aa3.72□□□□□ -1.81
RFX3-210ENST00000457373 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
RFX3-210ENST00000457373 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
RFX3-210ENST00000457373 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
RFX3-210ENST00000457373 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
RFX3-210ENST00000457373 MT1GP13640 62 aa3.61□□□□□ -1.83
RFX3-210ENST00000457373 MT1LQ93083 61 aa3.59□□□□□ -1.83
RFX3-210ENST00000457373 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
RFX3-210ENST00000457373 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
RFX3-210ENST00000457373 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
RFX3-210ENST00000457373 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
RFX3-210ENST00000457373 MT1MQ8N339 61 aa3.55□□□□□ -1.84
RFX3-210ENST00000457373 ROMO1P60602 79 aa3.51□□□□□ -1.85
RFX3-210ENST00000457373 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
RFX3-210ENST00000457373 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
RFX3-210ENST00000457373 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
RFX3-210ENST00000457373 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
RFX3-210ENST00000457373 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
RFX3-210ENST00000457373 MT4P47944 62 aa3.31□□□□□ -1.88
RFX3-210ENST00000457373 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
RFX3-210ENST00000457373 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
RFX3-210ENST00000457373 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
RFX3-210ENST00000457373 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
RFX3-210ENST00000457373 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
RFX3-210ENST00000457373 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
RFX3-210ENST00000457373 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
RFX3-210ENST00000457373 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
RFX3-210ENST00000457373 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
RFX3-210ENST00000457373 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
RFX3-210ENST00000457373 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
RFX3-210ENST00000457373 MT1AP04731 61 aa3.06□□□□□ -1.92
RFX3-210ENST00000457373 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
RFX3-210ENST00000457373 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
RFX3-210ENST00000457373 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
RFX3-210ENST00000457373 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
RFX3-210ENST00000457373 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
RFX3-210ENST00000457373 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
RFX3-210ENST00000457373 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
RFX3-210ENST00000457373 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
RFX3-210ENST00000457373 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
RFX3-210ENST00000457373 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
RFX3-210ENST00000457373 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
RFX3-210ENST00000457373 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
RFX3-210ENST00000457373 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
RFX3-210ENST00000457373 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
RFX3-210ENST00000457373 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
RFX3-210ENST00000457373 AHNAKQ09666 5890 aaKnown RBP2.39□□□□□ -2.03
RFX3-210ENST00000457373 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
RFX3-210ENST00000457373 INE1O15225 51 aa2.31□□□□□ -2.04
RFX3-210ENST00000457373 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
RFX3-210ENST00000457373 PRM1P04553 51 aa1.81□□□□□ -2.12
RFX3-210ENST00000457373 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
RFX3-210ENST00000457373 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
RFX3-210ENST00000457373 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
RFX3-210ENST00000457373 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 123.7 ms