RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 MACF1Q9UPN3 7388 aaKnown RBP2.41□□□□□ -2.02
FN1-213ENST00000456923 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
FN1-213ENST00000456923 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
FN1-213ENST00000456923 KRTAP10-7P60409 375 aaPredicted RBP2.38□□□□□ -2.03
FN1-213ENST00000456923 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
FN1-213ENST00000456923 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
FN1-213ENST00000456923 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
FN1-213ENST00000456923 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.03
FN1-213ENST00000456923 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
FN1-213ENST00000456923 LCE5AQ5TCM9 118 aa2.31□□□□□ -2.04
FN1-213ENST00000456923 FSIP2Q5CZC0 6907 aa2.31□□□□□ -2.04
FN1-213ENST00000456923 MT1EP04732 61 aa2.31□□□□□ -2.04
FN1-213ENST00000456923 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
FN1-213ENST00000456923 LCE3CQ5T5A8 94 aa2.28□□□□□ -2.04
FN1-213ENST00000456923 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
FN1-213ENST00000456923 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 KRTAP2-2Q9BYT5 123 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 SPRR2EP22531 72 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 SPRR2BP35325 72 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 SPRR2AP35326 72 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 KMT2DO14686 5537 aa2.27□□□□□ -2.05
FN1-213ENST00000456923 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
FN1-213ENST00000456923 KRTAP9-6A8MVA2 160 aa2.26□□□□□ -2.05
FN1-213ENST00000456923 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
FN1-213ENST00000456923 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
FN1-213ENST00000456923 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
FN1-213ENST00000456923 MT1GP13640 62 aa2.25□□□□□ -2.05
FN1-213ENST00000456923 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
FN1-213ENST00000456923 PRM1P04553 51 aa2.22□□□□□ -2.05
FN1-213ENST00000456923 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
FN1-213ENST00000456923 SPRR2DP22532 72 aa2.21□□□□□ -2.05
FN1-213ENST00000456923 MT1LQ93083 61 aa2.21□□□□□ -2.06
FN1-213ENST00000456923 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
FN1-213ENST00000456923 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
FN1-213ENST00000456923 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
FN1-213ENST00000456923 LCE3BQ5TA77 95 aa2.18□□□□□ -2.06
FN1-213ENST00000456923 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
FN1-213ENST00000456923 MT1MQ8N339 61 aa2.17□□□□□ -2.06
FN1-213ENST00000456923 LCE4AQ5TA78 99 aa2.16□□□□□ -2.06
FN1-213ENST00000456923 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
FN1-213ENST00000456923 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
FN1-213ENST00000456923 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
FN1-213ENST00000456923 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
FN1-213ENST00000456923 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
FN1-213ENST00000456923 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
FN1-213ENST00000456923 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
FN1-213ENST00000456923 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
FN1-213ENST00000456923 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
FN1-213ENST00000456923 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
FN1-213ENST00000456923 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
FN1-213ENST00000456923 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
FN1-213ENST00000456923 MT1AP04731 61 aa1.93□□□□□ -2.1
FN1-213ENST00000456923 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
FN1-213ENST00000456923 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
FN1-213ENST00000456923 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
FN1-213ENST00000456923 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
FN1-213ENST00000456923 KRTAP4-6Q9BYQ5 205 aa1.85□□□□□ -2.11
FN1-213ENST00000456923 KRTAP9-4Q9BYQ2 154 aa1.85□□□□□ -2.11
FN1-213ENST00000456923 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
FN1-213ENST00000456923 MT4P47944 62 aa1.79□□□□□ -2.12
FN1-213ENST00000456923 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
FN1-213ENST00000456923 KRTAP4-11Q9BYQ6 195 aa1.73□□□□□ -2.13
FN1-213ENST00000456923 MT3P25713 68 aa1.71□□□□□ -2.14
FN1-213ENST00000456923 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
FN1-213ENST00000456923 KRTAP9-9Q9BYP9 154 aa1.66□□□□□ -2.14
FN1-213ENST00000456923 MUC5ACP98088 5654 aa1.65□□□□□ -2.15
FN1-213ENST00000456923 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
FN1-213ENST00000456923 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
FN1-213ENST00000456923 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
FN1-213ENST00000456923 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
FN1-213ENST00000456923 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
FN1-213ENST00000456923 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.18
FN1-213ENST00000456923 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
FN1-213ENST00000456923 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
FN1-213ENST00000456923 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
FN1-213ENST00000456923 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
FN1-213ENST00000456923 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms