RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 KRTAP12-3P60328 96 aa3.9□□□□□ -1.78
SYPL1-202ENST00000455385 NEBP20929 6669 aa3.9□□□□□ -1.79
SYPL1-202ENST00000455385 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
SYPL1-202ENST00000455385 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
SYPL1-202ENST00000455385 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
SYPL1-202ENST00000455385 MT1LQ93083 61 aa3.84□□□□□ -1.79
SYPL1-202ENST00000455385 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
SYPL1-202ENST00000455385 MT1GP13640 62 aa3.79□□□□□ -1.8
SYPL1-202ENST00000455385 SPRR2DP22532 72 aa3.78□□□□□ -1.81
SYPL1-202ENST00000455385 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
SYPL1-202ENST00000455385 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
SYPL1-202ENST00000455385 MT1MQ8N339 61 aa3.74□□□□□ -1.81
SYPL1-202ENST00000455385 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
SYPL1-202ENST00000455385 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SYPL1-202ENST00000455385 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
SYPL1-202ENST00000455385 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SYPL1-202ENST00000455385 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
SYPL1-202ENST00000455385 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SYPL1-202ENST00000455385 LCE3BQ5TA77 95 aa3.65□□□□□ -1.82
SYPL1-202ENST00000455385 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
SYPL1-202ENST00000455385 LCE3CQ5T5A8 94 aa3.63□□□□□ -1.83
SYPL1-202ENST00000455385 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
SYPL1-202ENST00000455385 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
SYPL1-202ENST00000455385 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
SYPL1-202ENST00000455385 SVIPQ8NHG7 77 aa3.48□□□□□ -1.85
SYPL1-202ENST00000455385 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.85
SYPL1-202ENST00000455385 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.85
SYPL1-202ENST00000455385 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
SYPL1-202ENST00000455385 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
SYPL1-202ENST00000455385 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SYPL1-202ENST00000455385 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SYPL1-202ENST00000455385 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
SYPL1-202ENST00000455385 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
SYPL1-202ENST00000455385 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
SYPL1-202ENST00000455385 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
SYPL1-202ENST00000455385 H3BS24 57 aa3.3□□□□□ -1.88
SYPL1-202ENST00000455385 MT4P47944 62 aa3.29□□□□□ -1.88
SYPL1-202ENST00000455385 MT1AP04731 61 aa3.25□□□□□ -1.89
SYPL1-202ENST00000455385 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
SYPL1-202ENST00000455385 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
SYPL1-202ENST00000455385 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
SYPL1-202ENST00000455385 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
SYPL1-202ENST00000455385 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SYPL1-202ENST00000455385 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
SYPL1-202ENST00000455385 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
SYPL1-202ENST00000455385 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
SYPL1-202ENST00000455385 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
SYPL1-202ENST00000455385 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
SYPL1-202ENST00000455385 MT3P25713 68 aa2.95□□□□□ -1.94
SYPL1-202ENST00000455385 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
SYPL1-202ENST00000455385 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
SYPL1-202ENST00000455385 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
SYPL1-202ENST00000455385 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
SYPL1-202ENST00000455385 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
SYPL1-202ENST00000455385 KRTAP5-8O75690 187 aa2.71□□□□□ -1.97
SYPL1-202ENST00000455385 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SYPL1-202ENST00000455385 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SYPL1-202ENST00000455385 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
SYPL1-202ENST00000455385 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
SYPL1-202ENST00000455385 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
SYPL1-202ENST00000455385 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
SYPL1-202ENST00000455385 MUC5ACP98088 5654 aa2.53□□□□□ -2
SYPL1-202ENST00000455385 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SYPL1-202ENST00000455385 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
SYPL1-202ENST00000455385 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SYPL1-202ENST00000455385 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
SYPL1-202ENST00000455385 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SYPL1-202ENST00000455385 INE1O15225 51 aa2.29□□□□□ -2.04
SYPL1-202ENST00000455385 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SYPL1-202ENST00000455385 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SYPL1-202ENST00000455385 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SYPL1-202ENST00000455385 PRM1P04553 51 aa2.13□□□□□ -2.07
SYPL1-202ENST00000455385 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
SYPL1-202ENST00000455385 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SYPL1-202ENST00000455385 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SYPL1-202ENST00000455385 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SYPL1-202ENST00000455385 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 107.3 ms