RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
CCDC90B-202ENST00000455220 H3BS24 57 aa6.05□□□□□ -1.44
CCDC90B-202ENST00000455220 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
CCDC90B-202ENST00000455220 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
CCDC90B-202ENST00000455220 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
CCDC90B-202ENST00000455220 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
CCDC90B-202ENST00000455220 SPRR2EP22531 72 aa5.98□□□□□ -1.45
CCDC90B-202ENST00000455220 SPRR2BP35325 72 aa5.98□□□□□ -1.45
CCDC90B-202ENST00000455220 SPRR2AP35326 72 aa5.98□□□□□ -1.45
CCDC90B-202ENST00000455220 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
CCDC90B-202ENST00000455220 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
CCDC90B-202ENST00000455220 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
CCDC90B-202ENST00000455220 PRAC1Q96KF2 57 aa5.94□□□□□ -1.46
CCDC90B-202ENST00000455220 MT1LQ93083 61 aa5.93□□□□□ -1.46
CCDC90B-202ENST00000455220 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CCDC90B-202ENST00000455220 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
CCDC90B-202ENST00000455220 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
CCDC90B-202ENST00000455220 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
CCDC90B-202ENST00000455220 MT1GP13640 62 aa5.86□□□□□ -1.47
CCDC90B-202ENST00000455220 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
CCDC90B-202ENST00000455220 MT1MQ8N339 61 aa5.78□□□□□ -1.48
CCDC90B-202ENST00000455220 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
CCDC90B-202ENST00000455220 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
CCDC90B-202ENST00000455220 SPRR2DP22532 72 aa5.77□□□□□ -1.49
CCDC90B-202ENST00000455220 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
CCDC90B-202ENST00000455220 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
CCDC90B-202ENST00000455220 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
CCDC90B-202ENST00000455220 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
CCDC90B-202ENST00000455220 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
CCDC90B-202ENST00000455220 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
CCDC90B-202ENST00000455220 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
CCDC90B-202ENST00000455220 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
CCDC90B-202ENST00000455220 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
CCDC90B-202ENST00000455220 GPR98Q8WXG9 6306 aa5.33□□□□□ -1.56
CCDC90B-202ENST00000455220 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
CCDC90B-202ENST00000455220 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-202ENST00000455220 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CCDC90B-202ENST00000455220 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
CCDC90B-202ENST00000455220 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
CCDC90B-202ENST00000455220 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
CCDC90B-202ENST00000455220 MT1AP04731 61 aa5.06□□□□□ -1.6
CCDC90B-202ENST00000455220 MT4P47944 62 aa5.03□□□□□ -1.6
CCDC90B-202ENST00000455220 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
CCDC90B-202ENST00000455220 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
CCDC90B-202ENST00000455220 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
CCDC90B-202ENST00000455220 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
CCDC90B-202ENST00000455220 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
CCDC90B-202ENST00000455220 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
CCDC90B-202ENST00000455220 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
CCDC90B-202ENST00000455220 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
CCDC90B-202ENST00000455220 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
CCDC90B-202ENST00000455220 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
CCDC90B-202ENST00000455220 MT3P25713 68 aa4.59□□□□□ -1.67
CCDC90B-202ENST00000455220 NDUFAF8A1L188 74 aa4.53□□□□□ -1.69
CCDC90B-202ENST00000455220 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CCDC90B-202ENST00000455220 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
CCDC90B-202ENST00000455220 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
CCDC90B-202ENST00000455220 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
CCDC90B-202ENST00000455220 MUC5ACP98088 5654 aa4.15□□□□□ -1.75
CCDC90B-202ENST00000455220 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
CCDC90B-202ENST00000455220 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
CCDC90B-202ENST00000455220 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
CCDC90B-202ENST00000455220 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
CCDC90B-202ENST00000455220 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
CCDC90B-202ENST00000455220 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
CCDC90B-202ENST00000455220 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
CCDC90B-202ENST00000455220 INE1O15225 51 aa3.75□□□□□ -1.81
CCDC90B-202ENST00000455220 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
CCDC90B-202ENST00000455220 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
CCDC90B-202ENST00000455220 PRM1P04553 51 aa3.34□□□□□ -1.88
CCDC90B-202ENST00000455220 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
CCDC90B-202ENST00000455220 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
CCDC90B-202ENST00000455220 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
CCDC90B-202ENST00000455220 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
CCDC90B-202ENST00000455220 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
CCDC90B-202ENST00000455220 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
CCDC90B-202ENST00000455220 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 131.5 ms