RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
ECHDC1-210ENST00000454859 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
ECHDC1-210ENST00000454859 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
ECHDC1-210ENST00000454859 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
ECHDC1-210ENST00000454859 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
ECHDC1-210ENST00000454859 KRTAP8-1Q8IUC2 63 aa2.71□□□□□ -1.98
ECHDC1-210ENST00000454859 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
ECHDC1-210ENST00000454859 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
ECHDC1-210ENST00000454859 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
ECHDC1-210ENST00000454859 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
ECHDC1-210ENST00000454859 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
ECHDC1-210ENST00000454859 KRTAP12-3P60328 96 aa2.61□□□□□ -1.99
ECHDC1-210ENST00000454859 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
ECHDC1-210ENST00000454859 NDUFAF8A1L188 74 aa2.56□□□□□ -2
ECHDC1-210ENST00000454859 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
ECHDC1-210ENST00000454859 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
ECHDC1-210ENST00000454859 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
ECHDC1-210ENST00000454859 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
ECHDC1-210ENST00000454859 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
ECHDC1-210ENST00000454859 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
ECHDC1-210ENST00000454859 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
ECHDC1-210ENST00000454859 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
ECHDC1-210ENST00000454859 MT1EP04732 61 aa2.47□□□□□ -2.01
ECHDC1-210ENST00000454859 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
ECHDC1-210ENST00000454859 KRTAP5-2Q701N4 177 aa2.45□□□□□ -2.02
ECHDC1-210ENST00000454859 KMT2DO14686 5537 aa2.44□□□□□ -2.02
ECHDC1-210ENST00000454859 MT1LQ93083 61 aa2.43□□□□□ -2.02
ECHDC1-210ENST00000454859 NEBP20929 6669 aa2.42□□□□□ -2.02
ECHDC1-210ENST00000454859 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
ECHDC1-210ENST00000454859 MT1GP13640 62 aa2.41□□□□□ -2.02
ECHDC1-210ENST00000454859 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
ECHDC1-210ENST00000454859 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
ECHDC1-210ENST00000454859 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
ECHDC1-210ENST00000454859 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
ECHDC1-210ENST00000454859 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
ECHDC1-210ENST00000454859 MT1MQ8N339 61 aa2.33□□□□□ -2.04
ECHDC1-210ENST00000454859 KRTAP2-2Q9BYT5 123 aa2.33□□□□□ -2.04
ECHDC1-210ENST00000454859 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
ECHDC1-210ENST00000454859 SPRR2EP22531 72 aa2.26□□□□□ -2.05
ECHDC1-210ENST00000454859 SPRR2BP35325 72 aa2.26□□□□□ -2.05
ECHDC1-210ENST00000454859 SPRR2AP35326 72 aa2.26□□□□□ -2.05
ECHDC1-210ENST00000454859 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
ECHDC1-210ENST00000454859 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
ECHDC1-210ENST00000454859 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
ECHDC1-210ENST00000454859 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
ECHDC1-210ENST00000454859 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
ECHDC1-210ENST00000454859 SPRR2DP22532 72 aa2.18□□□□□ -2.06
ECHDC1-210ENST00000454859 INE1O15225 51 aa2.16□□□□□ -2.06
ECHDC1-210ENST00000454859 MT3P25713 68 aa2.15□□□□□ -2.07
ECHDC1-210ENST00000454859 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
ECHDC1-210ENST00000454859 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
ECHDC1-210ENST00000454859 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
ECHDC1-210ENST00000454859 MT1AP04731 61 aa2.11□□□□□ -2.07
ECHDC1-210ENST00000454859 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
ECHDC1-210ENST00000454859 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
ECHDC1-210ENST00000454859 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
ECHDC1-210ENST00000454859 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-210ENST00000454859 MT4P47944 62 aa1.95□□□□□ -2.1
ECHDC1-210ENST00000454859 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
ECHDC1-210ENST00000454859 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
ECHDC1-210ENST00000454859 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
ECHDC1-210ENST00000454859 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
ECHDC1-210ENST00000454859 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
ECHDC1-210ENST00000454859 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
ECHDC1-210ENST00000454859 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
ECHDC1-210ENST00000454859 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
ECHDC1-210ENST00000454859 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
ECHDC1-210ENST00000454859 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
ECHDC1-210ENST00000454859 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
ECHDC1-210ENST00000454859 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
ECHDC1-210ENST00000454859 PRM1P04553 51 aa1.54□□□□□ -2.16
ECHDC1-210ENST00000454859 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
ECHDC1-210ENST00000454859 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.2
ECHDC1-210ENST00000454859 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
ECHDC1-210ENST00000454859 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
ECHDC1-210ENST00000454859 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
ECHDC1-210ENST00000454859 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 157.7 ms