RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 MUC12Q9UKN1 5478 aa2.72□□□□□ -1.97
NCL-206ENST00000454824 PSPHP1O15172 72 aa2.71□□□□□ -1.98
NCL-206ENST00000454824 K7ERS5 55 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 SPRR2EP22531 72 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 SPRR2BP35325 72 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 SPRR2AP35326 72 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
NCL-206ENST00000454824 Q1T7F1 81 aa2.68□□□□□ -1.98
NCL-206ENST00000454824 TNP1P09430 55 aa2.65□□□□□ -1.99
NCL-206ENST00000454824 NEBP20929 6669 aa2.64□□□□□ -1.99
NCL-206ENST00000454824 A6NED7 52 aa2.64□□□□□ -1.99
NCL-206ENST00000454824 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
NCL-206ENST00000454824 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
NCL-206ENST00000454824 C10orf95Q9H7T3 257 aa2.62□□□□□ -1.99
NCL-206ENST00000454824 SPRR2DP22532 72 aa2.6□□□□□ -1.99
NCL-206ENST00000454824 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
NCL-206ENST00000454824 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
NCL-206ENST00000454824 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
NCL-206ENST00000454824 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
NCL-206ENST00000454824 LCE3AQ5TA76 89 aa2.55□□□□□ -2
NCL-206ENST00000454824 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
NCL-206ENST00000454824 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
NCL-206ENST00000454824 LCE1EQ5T753 118 aa2.54□□□□□ -2
NCL-206ENST00000454824 MT1EP04732 61 aa2.53□□□□□ -2
NCL-206ENST00000454824 KRTAP19-3Q7Z4W3 81 aa2.51□□□□□ -2.01
NCL-206ENST00000454824 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
NCL-206ENST00000454824 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
NCL-206ENST00000454824 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
NCL-206ENST00000454824 MT1GP13640 62 aa2.47□□□□□ -2.01
NCL-206ENST00000454824 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
NCL-206ENST00000454824 ROMO1P60602 79 aa2.46□□□□□ -2.02
NCL-206ENST00000454824 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
NCL-206ENST00000454824 MT1LQ93083 61 aa2.44□□□□□ -2.02
NCL-206ENST00000454824 MT1MQ8N339 61 aa2.41□□□□□ -2.02
NCL-206ENST00000454824 BRK1Q8WUW1 75 aa2.39□□□□□ -2.03
NCL-206ENST00000454824 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
NCL-206ENST00000454824 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
NCL-206ENST00000454824 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
NCL-206ENST00000454824 LCE3EQ5T5B0 92 aa2.34□□□□□ -2.03
NCL-206ENST00000454824 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
NCL-206ENST00000454824 MT4P47944 62 aa2.27□□□□□ -2.05
NCL-206ENST00000454824 PMAIP1Q13794 54 aa2.26□□□□□ -2.05
NCL-206ENST00000454824 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
NCL-206ENST00000454824 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
NCL-206ENST00000454824 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
NCL-206ENST00000454824 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
NCL-206ENST00000454824 PRO0628Q9UI54 55 aa2.14□□□□□ -2.07
NCL-206ENST00000454824 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
NCL-206ENST00000454824 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
NCL-206ENST00000454824 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
NCL-206ENST00000454824 MT1AP04731 61 aa2.09□□□□□ -2.07
NCL-206ENST00000454824 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
NCL-206ENST00000454824 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
NCL-206ENST00000454824 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
NCL-206ENST00000454824 KTN1-AS1Q86SY8 53 aa2.02□□□□□ -2.09
NCL-206ENST00000454824 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
NCL-206ENST00000454824 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
NCL-206ENST00000454824 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
NCL-206ENST00000454824 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
NCL-206ENST00000454824 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
NCL-206ENST00000454824 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
NCL-206ENST00000454824 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
NCL-206ENST00000454824 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
NCL-206ENST00000454824 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
NCL-206ENST00000454824 OBSCNQ5VST9 7968 aa1.79□□□□□ -2.12
NCL-206ENST00000454824 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
NCL-206ENST00000454824 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
NCL-206ENST00000454824 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
NCL-206ENST00000454824 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
NCL-206ENST00000454824 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
NCL-206ENST00000454824 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
NCL-206ENST00000454824 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
NCL-206ENST00000454824 INE1O15225 51 aa1.26□□□□□ -2.21
NCL-206ENST00000454824 PRM1P04553 51 aa1.25□□□□□ -2.21
NCL-206ENST00000454824 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
NCL-206ENST00000454824 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
NCL-206ENST00000454824 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms