RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
RPE-216ENST00000454822 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
RPE-216ENST00000454822 KMT2DO14686 5537 aa3.33□□□□□ -1.88
RPE-216ENST00000454822 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
RPE-216ENST00000454822 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
RPE-216ENST00000454822 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
RPE-216ENST00000454822 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
RPE-216ENST00000454822 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
RPE-216ENST00000454822 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
RPE-216ENST00000454822 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.89
RPE-216ENST00000454822 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
RPE-216ENST00000454822 INE1O15225 51 aa3.16□□□□□ -1.9
RPE-216ENST00000454822 MT1EP04732 61 aa3.16□□□□□ -1.9
RPE-216ENST00000454822 MT1LQ93083 61 aa3.12□□□□□ -1.91
RPE-216ENST00000454822 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
RPE-216ENST00000454822 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
RPE-216ENST00000454822 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
RPE-216ENST00000454822 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
RPE-216ENST00000454822 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
RPE-216ENST00000454822 MDN1Q9NU22 5596 aa3□□□□□ -1.93
RPE-216ENST00000454822 MT1GP13640 62 aa2.98□□□□□ -1.93
RPE-216ENST00000454822 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
RPE-216ENST00000454822 MT1MQ8N339 61 aa2.96□□□□□ -1.93
RPE-216ENST00000454822 KRTAP9-7A8MTY7 169 aa2.95□□□□□ -1.94
RPE-216ENST00000454822 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
RPE-216ENST00000454822 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
RPE-216ENST00000454822 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
RPE-216ENST00000454822 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
RPE-216ENST00000454822 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
RPE-216ENST00000454822 KRTAP2-3P0C7H8 128 aa2.86□□□□□ -1.95
RPE-216ENST00000454822 KRTAP2-4Q9BYR9 128 aa2.86□□□□□ -1.95
RPE-216ENST00000454822 KRTAP2-1Q9BYU5 128 aa2.86□□□□□ -1.95
RPE-216ENST00000454822 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
RPE-216ENST00000454822 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
RPE-216ENST00000454822 NEBP20929 6669 aa2.81□□□□□ -1.96
RPE-216ENST00000454822 SPRR2EP22531 72 aa2.78□□□□□ -1.96
RPE-216ENST00000454822 SPRR2BP35325 72 aa2.78□□□□□ -1.96
RPE-216ENST00000454822 SPRR2AP35326 72 aa2.78□□□□□ -1.96
RPE-216ENST00000454822 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
RPE-216ENST00000454822 SPRR2DP22532 72 aa2.68□□□□□ -1.98
RPE-216ENST00000454822 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
RPE-216ENST00000454822 MT1AP04731 61 aa2.64□□□□□ -1.99
RPE-216ENST00000454822 KRTAP6-1Q3LI64 71 aa2.64□□□□□ -1.99
RPE-216ENST00000454822 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
RPE-216ENST00000454822 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
RPE-216ENST00000454822 KRTAP2-2Q9BYT5 123 aa2.5□□□□□ -2.01
RPE-216ENST00000454822 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
RPE-216ENST00000454822 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
RPE-216ENST00000454822 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
RPE-216ENST00000454822 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
RPE-216ENST00000454822 MT4P47944 62 aa2.39□□□□□ -2.03
RPE-216ENST00000454822 MT3P25713 68 aa2.38□□□□□ -2.03
RPE-216ENST00000454822 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
RPE-216ENST00000454822 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
RPE-216ENST00000454822 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
RPE-216ENST00000454822 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
RPE-216ENST00000454822 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
RPE-216ENST00000454822 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
RPE-216ENST00000454822 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
RPE-216ENST00000454822 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.06
RPE-216ENST00000454822 PRM1P04553 51 aa2.15□□□□□ -2.07
RPE-216ENST00000454822 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
RPE-216ENST00000454822 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
RPE-216ENST00000454822 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
RPE-216ENST00000454822 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
RPE-216ENST00000454822 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
RPE-216ENST00000454822 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
RPE-216ENST00000454822 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
RPE-216ENST00000454822 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
RPE-216ENST00000454822 MUC5BQ9HC84 5762 aaPredicted RBP1.86□□□□□ -2.11
RPE-216ENST00000454822 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
RPE-216ENST00000454822 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
RPE-216ENST00000454822 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
RPE-216ENST00000454822 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
RPE-216ENST00000454822 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
RPE-216ENST00000454822 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
RPE-216ENST00000454822 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 85.2 ms