RNA–Protein interactions for RNA: ENST00000454757.6

EGFR-206, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 5,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-206ENST00000454757 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
EGFR-206ENST00000454757 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
EGFR-206ENST00000454757 MT1MQ8N339 61 aa4.63□□□□□ -1.67
EGFR-206ENST00000454757 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
EGFR-206ENST00000454757 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
EGFR-206ENST00000454757 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
EGFR-206ENST00000454757 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
EGFR-206ENST00000454757 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
EGFR-206ENST00000454757 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
EGFR-206ENST00000454757 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
EGFR-206ENST00000454757 LOC100996750A0A140TA64 210 aa4.39□□□□□ -1.71
EGFR-206ENST00000454757 UBR4Q5T4S7 5183 aa4.36□□□□□ -1.71
EGFR-206ENST00000454757 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
EGFR-206ENST00000454757 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
EGFR-206ENST00000454757 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
EGFR-206ENST00000454757 MT1AP04731 61 aa4.35□□□□□ -1.71
EGFR-206ENST00000454757 MUC2Q02817 5179 aa4.35□□□□□ -1.71
EGFR-206ENST00000454757 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
EGFR-206ENST00000454757 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.72
EGFR-206ENST00000454757 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
EGFR-206ENST00000454757 PRM1P04553 51 aa4.29□□□□□ -1.72
EGFR-206ENST00000454757 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
EGFR-206ENST00000454757 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
EGFR-206ENST00000454757 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
EGFR-206ENST00000454757 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
EGFR-206ENST00000454757 FSIP2Q5CZC0 6907 aa4.25□□□□□ -1.73
EGFR-206ENST00000454757 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
EGFR-206ENST00000454757 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
EGFR-206ENST00000454757 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
EGFR-206ENST00000454757 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
EGFR-206ENST00000454757 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
EGFR-206ENST00000454757 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
EGFR-206ENST00000454757 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
EGFR-206ENST00000454757 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
EGFR-206ENST00000454757 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
EGFR-206ENST00000454757 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
EGFR-206ENST00000454757 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
EGFR-206ENST00000454757 KRTAP9-4Q9BYQ2 154 aa3.97□□□□□ -1.77
EGFR-206ENST00000454757 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
EGFR-206ENST00000454757 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
EGFR-206ENST00000454757 KMT2DO14686 5537 aa3.82□□□□□ -1.8
EGFR-206ENST00000454757 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
EGFR-206ENST00000454757 USH2AO75445 5202 aa3.78□□□□□ -1.8
EGFR-206ENST00000454757 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
EGFR-206ENST00000454757 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
EGFR-206ENST00000454757 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
EGFR-206ENST00000454757 NEBP20929 6669 aa3.59□□□□□ -1.83
EGFR-206ENST00000454757 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
EGFR-206ENST00000454757 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
EGFR-206ENST00000454757 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
EGFR-206ENST00000454757 SSPOA2VEC9 5147 aa3.4□□□□□ -1.86
EGFR-206ENST00000454757 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
EGFR-206ENST00000454757 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
EGFR-206ENST00000454757 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
EGFR-206ENST00000454757 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
EGFR-206ENST00000454757 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
EGFR-206ENST00000454757 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
EGFR-206ENST00000454757 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
EGFR-206ENST00000454757 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
EGFR-206ENST00000454757 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
EGFR-206ENST00000454757 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
EGFR-206ENST00000454757 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
EGFR-206ENST00000454757 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
EGFR-206ENST00000454757 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
EGFR-206ENST00000454757 KRTAP5-8O75690 187 aa2.54□□□□□ -2
EGFR-206ENST00000454757 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
EGFR-206ENST00000454757 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
EGFR-206ENST00000454757 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
EGFR-206ENST00000454757 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
EGFR-206ENST00000454757 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
EGFR-206ENST00000454757 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
EGFR-206ENST00000454757 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
EGFR-206ENST00000454757 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
EGFR-206ENST00000454757 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
EGFR-206ENST00000454757 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
EGFR-206ENST00000454757 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
EGFR-206ENST00000454757 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms