RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 SPRR2GQ9BYE4 73 aa3.27□□□□□ -1.89
BRCC3-208ENST00000453705 SPRR5A0A1B0GTR4 108 aa3.26□□□□□ -1.89
BRCC3-208ENST00000453705 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
BRCC3-208ENST00000453705 USH2AO75445 5202 aa3.21□□□□□ -1.9
BRCC3-208ENST00000453705 MT2AP02795 61 aa3.2□□□□□ -1.9
BRCC3-208ENST00000453705 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
BRCC3-208ENST00000453705 KRTAP19-8Q3LI54 63 aa3.2□□□□□ -1.9
BRCC3-208ENST00000453705 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
BRCC3-208ENST00000453705 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
BRCC3-208ENST00000453705 MT1FP04733 61 aa3.16□□□□□ -1.9
BRCC3-208ENST00000453705 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.9
BRCC3-208ENST00000453705 MT3P25713 68 aa3.13□□□□□ -1.91
BRCC3-208ENST00000453705 KRTAP10-12P60413 245 aa3.09□□□□□ -1.91
BRCC3-208ENST00000453705 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
BRCC3-208ENST00000453705 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
BRCC3-208ENST00000453705 MT1BP07438 61 aa3.07□□□□□ -1.92
BRCC3-208ENST00000453705 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
BRCC3-208ENST00000453705 TNP1P09430 55 aa3.04□□□□□ -1.92
BRCC3-208ENST00000453705 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
BRCC3-208ENST00000453705 MT1XP80297 61 aa2.99□□□□□ -1.93
BRCC3-208ENST00000453705 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
BRCC3-208ENST00000453705 KRTAP10-7P60409 375 aaPredicted RBP2.98□□□□□ -1.93
BRCC3-208ENST00000453705 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
BRCC3-208ENST00000453705 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
BRCC3-208ENST00000453705 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
BRCC3-208ENST00000453705 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
BRCC3-208ENST00000453705 KRTAP2-1Q9BYU5 128 aa2.91□□□□□ -1.94
BRCC3-208ENST00000453705 KRTAP19-6Q3LI70 58 aa2.86□□□□□ -1.95
BRCC3-208ENST00000453705 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
BRCC3-208ENST00000453705 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
BRCC3-208ENST00000453705 MUC12Q9UKN1 5478 aa2.83□□□□□ -1.96
BRCC3-208ENST00000453705 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
BRCC3-208ENST00000453705 KMT2DO14686 5537 aa2.76□□□□□ -1.97
BRCC3-208ENST00000453705 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
BRCC3-208ENST00000453705 KRTAP12-3P60328 96 aa2.75□□□□□ -1.97
BRCC3-208ENST00000453705 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
BRCC3-208ENST00000453705 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
BRCC3-208ENST00000453705 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
BRCC3-208ENST00000453705 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
BRCC3-208ENST00000453705 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
BRCC3-208ENST00000453705 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
BRCC3-208ENST00000453705 MT1EP04732 61 aa2.63□□□□□ -1.99
BRCC3-208ENST00000453705 MT1LQ93083 61 aa2.59□□□□□ -2
BRCC3-208ENST00000453705 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
BRCC3-208ENST00000453705 SPRR2FQ96RM1 72 aa2.52□□□□□ -2.01
BRCC3-208ENST00000453705 MT1GP13640 62 aa2.5□□□□□ -2.01
BRCC3-208ENST00000453705 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
BRCC3-208ENST00000453705 MT1MQ8N339 61 aa2.45□□□□□ -2.02
BRCC3-208ENST00000453705 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
BRCC3-208ENST00000453705 SPRR2EP22531 72 aa2.42□□□□□ -2.02
BRCC3-208ENST00000453705 SPRR2BP35325 72 aa2.42□□□□□ -2.02
BRCC3-208ENST00000453705 SPRR2AP35326 72 aa2.42□□□□□ -2.02
BRCC3-208ENST00000453705 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
BRCC3-208ENST00000453705 SPRR2DP22532 72 aa2.35□□□□□ -2.03
BRCC3-208ENST00000453705 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
BRCC3-208ENST00000453705 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
BRCC3-208ENST00000453705 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
BRCC3-208ENST00000453705 MT1AP04731 61 aa2.24□□□□□ -2.05
BRCC3-208ENST00000453705 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
BRCC3-208ENST00000453705 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
BRCC3-208ENST00000453705 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
BRCC3-208ENST00000453705 PRM1P04553 51 aa2.18□□□□□ -2.06
BRCC3-208ENST00000453705 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
BRCC3-208ENST00000453705 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
BRCC3-208ENST00000453705 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
BRCC3-208ENST00000453705 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
BRCC3-208ENST00000453705 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
BRCC3-208ENST00000453705 MT4P47944 62 aa2.05□□□□□ -2.08
BRCC3-208ENST00000453705 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
BRCC3-208ENST00000453705 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
BRCC3-208ENST00000453705 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
BRCC3-208ENST00000453705 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
BRCC3-208ENST00000453705 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
BRCC3-208ENST00000453705 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
BRCC3-208ENST00000453705 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
BRCC3-208ENST00000453705 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
BRCC3-208ENST00000453705 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
BRCC3-208ENST00000453705 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 95.3 ms