RNA–Protein interactions for RNA: ENST00000453371.2

AGAP1-209, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, human

TSL 5

Gene AGAP1, Length 2,138 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP1-209	ENST00000453371	INE1	O15225	51 aa		6.07	□□□□□ -1.44
AGAP1-209	ENST00000453371	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.04	□□□□□ -1.44
AGAP1-209	ENST00000453371	KRTAP19-3	Q7Z4W3	81 aa		5.97	□□□□□ -1.45
AGAP1-209	ENST00000453371	KRTAP2-3	P0C7H8	128 aa		5.96	□□□□□ -1.46
AGAP1-209	ENST00000453371	MT1G	P13640	62 aa		5.96	□□□□□ -1.46
AGAP1-209	ENST00000453371	KRTAP2-4	Q9BYR9	128 aa		5.96	□□□□□ -1.46
AGAP1-209	ENST00000453371	KRTAP2-1	Q9BYU5	128 aa		5.96	□□□□□ -1.46
AGAP1-209	ENST00000453371	CRCT1	Q9UGL9	99 aa		5.92	□□□□□ -1.46
AGAP1-209	ENST00000453371	MT1M	Q8N339	61 aa		5.92	□□□□□ -1.46
AGAP1-209	ENST00000453371	KRTAP4-3	Q9BYR4	195 aa		5.84	□□□□□ -1.47
AGAP1-209	ENST00000453371	MUC12	Q9UKN1	5478 aa		5.83	□□□□□ -1.48
AGAP1-209	ENST00000453371	SPRR2F	Q96RM1	72 aa		5.82	□□□□□ -1.48
AGAP1-209	ENST00000453371	LCE5A	Q5TCM9	118 aa		5.8	□□□□□ -1.48
AGAP1-209	ENST00000453371	KRTAP9-7	A8MTY7	169 aa		5.77	□□□□□ -1.49
AGAP1-209	ENST00000453371	LOC100996750	A0A140TA64	210 aa		5.76	□□□□□ -1.49
AGAP1-209	ENST00000453371	MACF1	Q9UPN3	7388 aa	Known RBP	5.71	□□□□□ -1.5
AGAP1-209	ENST00000453371	KRTAP4-6	Q9BYQ5	205 aa		5.62	□□□□□ -1.51
AGAP1-209	ENST00000453371	KRTAP5-9	P26371	169 aa		5.58	□□□□□ -1.52
AGAP1-209	ENST00000453371	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.57	□□□□□ -1.52
AGAP1-209	ENST00000453371	LCE1A	Q5T7P2	110 aa		5.5	□□□□□ -1.53
AGAP1-209	ENST00000453371	SYNE2	Q8WXH0	6885 aa	Known RBP	5.46	□□□□□ -1.54
AGAP1-209	ENST00000453371	DST	Q03001	7570 aa	Known RBP	5.43	□□□□□ -1.54
AGAP1-209	ENST00000453371	MDN1	Q9NU22	5596 aa		5.41	□□□□□ -1.54
AGAP1-209	ENST00000453371	SPRR2E	P22531	72 aa		5.38	□□□□□ -1.55
AGAP1-209	ENST00000453371	SPRR2B	P35325	72 aa		5.38	□□□□□ -1.55
AGAP1-209	ENST00000453371	SPRR2A	P35326	72 aa		5.38	□□□□□ -1.55
AGAP1-209	ENST00000453371	MT1A	P04731	61 aa		5.32	□□□□□ -1.56
AGAP1-209	ENST00000453371	KRTAP6-1	Q3LI64	71 aa		5.28	□□□□□ -1.56
AGAP1-209	ENST00000453371	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.28	□□□□□ -1.56
AGAP1-209	ENST00000453371	LCE3B	Q5TA77	95 aa		5.27	□□□□□ -1.57
AGAP1-209	ENST00000453371	KRTAP6-3	Q3LI67	103 aa		5.22	□□□□□ -1.57
AGAP1-209	ENST00000453371	SPRR2D	P22532	72 aa		5.17	□□□□□ -1.58
AGAP1-209	ENST00000453371	KRTAP12-4	P60329	112 aa		5.16	□□□□□ -1.58
AGAP1-209	ENST00000453371	NEB	P20929	6669 aa		5.07	□□□□□ -1.6
AGAP1-209	ENST00000453371	KRTAP4-9	Q9BYQ8	210 aa		5.06	□□□□□ -1.6
AGAP1-209	ENST00000453371	SYNE1	Q8NF91	8797 aa	Known RBP	5.01	□□□□□ -1.61
AGAP1-209	ENST00000453371	KRTAP9-4	Q9BYQ2	154 aa		5	□□□□□ -1.61
AGAP1-209	ENST00000453371	KRTAP20-1	Q3LI63	56 aa		4.99	□□□□□ -1.61
AGAP1-209	ENST00000453371	LCE3D	Q9BYE3	92 aa		4.97	□□□□□ -1.61
AGAP1-209	ENST00000453371	LCE3E	Q5T5B0	92 aa		4.9	□□□□□ -1.63
AGAP1-209	ENST00000453371	GPR98	Q8WXG9	6306 aa		4.83	□□□□□ -1.64
AGAP1-209	ENST00000453371	MT3	P25713	68 aa		4.79	□□□□□ -1.64
AGAP1-209	ENST00000453371	KRTAP5-4	Q6L8H1	288 aa		4.78	□□□□□ -1.64
AGAP1-209	ENST00000453371	KRTAP6-2	Q3LI66	62 aa		4.78	□□□□□ -1.64
AGAP1-209	ENST00000453371	KRTAP9-9	Q9BYP9	154 aa		4.6	□□□□□ -1.67
AGAP1-209	ENST00000453371	LCE4A	Q5TA78	99 aa		4.57	□□□□□ -1.68
AGAP1-209	ENST00000453371	KRTAP4-12	Q9BQ66	201 aa		4.57	□□□□□ -1.68
AGAP1-209	ENST00000453371	PRM1	P04553	51 aa		4.52	□□□□□ -1.69
AGAP1-209	ENST00000453371	MT4	P47944	62 aa		4.48	□□□□□ -1.69
AGAP1-209	ENST00000453371	KRTAP20-2	Q3LI61	65 aa		4.46	□□□□□ -1.7
AGAP1-209	ENST00000453371	KRTAP5-2	Q701N4	177 aa		4.43	□□□□□ -1.7
AGAP1-209	ENST00000453371	KRTAP2-2	Q9BYT5	123 aa		4.4	□□□□□ -1.71
AGAP1-209	ENST00000453371	LCE1D	Q5T752	114 aa		4.39	□□□□□ -1.71
AGAP1-209	ENST00000453371	OBSCN	Q5VST9	7968 aa		4.36	□□□□□ -1.71
AGAP1-209	ENST00000453371	KRTAP4-2	Q9BYR5	136 aa		4.32	□□□□□ -1.72
AGAP1-209	ENST00000453371	HMCN1	Q96RW7	5635 aa		4.3	□□□□□ -1.72
AGAP1-209	ENST00000453371	KRTAP5-3	Q6L8H2	238 aa		4.27	□□□□□ -1.73
AGAP1-209	ENST00000453371	KRTAP4-11	Q9BYQ6	195 aa		4.1	□□□□□ -1.75
AGAP1-209	ENST00000453371	AHNAK2	Q8IVF2	5795 aa		4.06	□□□□□ -1.76
AGAP1-209	ENST00000453371	LCE1E	Q5T753	118 aa		4.03	□□□□□ -1.76
AGAP1-209	ENST00000453371	KRTAP5-10	Q6L8G5	202 aa		3.94	□□□□□ -1.78
AGAP1-209	ENST00000453371	KRTAP5-7	Q6L8G8	165 aa		3.92	□□□□□ -1.78
AGAP1-209	ENST00000453371	MUC5AC	P98088	5654 aa		3.92	□□□□□ -1.78
AGAP1-209	ENST00000453371	LCE1B	Q5T7P3	118 aa		3.81	□□□□□ -1.8
AGAP1-209	ENST00000453371	LCE1C	Q5T751	118 aa		3.77	□□□□□ -1.81
AGAP1-209	ENST00000453371	KRTAP5-1	Q6L8H4	278 aa		3.76	□□□□□ -1.81
AGAP1-209	ENST00000453371	AHNAK	Q09666	5890 aa	Known RBP	3.69	□□□□□ -1.82
AGAP1-209	ENST00000453371	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.59	□□□□□ -1.84
AGAP1-209	ENST00000453371	KRTAP5-8	O75690	187 aa		3.58	□□□□□ -1.84
AGAP1-209	ENST00000453371	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.58	□□□□□ -1.84
AGAP1-209	ENST00000453371	KRTAP21-2	Q3LI59	83 aa		3.44	□□□□□ -1.86
AGAP1-209	ENST00000453371	KRTAP5-11	Q6L8G4	156 aa		3.28	□□□□□ -1.89
AGAP1-209	ENST00000453371	KRTAP4-4	Q9BYR3	166 aa		3.03	□□□□□ -1.92
AGAP1-209	ENST00000453371	LCE1F	Q5T754	118 aa		2.92	□□□□□ -1.94
AGAP1-209	ENST00000453371	KRTAP21-1	Q3LI58	79 aa		2.86	□□□□□ -1.95
AGAP1-209	ENST00000453371	PHGR1	C9JFL3	82 aa		2.81	□□□□□ -1.96
AGAP1-209	ENST00000453371	MUC19	Q7Z5P9	8384 aa		2.66	□□□□□ -1.98
AGAP1-209	ENST00000453371	MUC16	Q8WXI7	14507 aa		1.86	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 127.2 ms