RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DMDP11532 3685 aa0.75□□□□□ -2.29
HMGB3P21-201ENST00000452483 A0A096LNI7 61 aa0.75□□□□□ -2.29
HMGB3P21-201ENST00000452483 FLGP20930 4061 aaPredicted RBP0.75□□□□□ -2.29
HMGB3P21-201ENST00000452483 CSMD2Q7Z408 3487 aa0.74□□□□□ -2.29
HMGB3P21-201ENST00000452483 USH2AO75445 5202 aa0.74□□□□□ -2.29
HMGB3P21-201ENST00000452483 HRNRQ86YZ3 2850 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P21-201ENST00000452483 CENPEQ02224 2701 aa0.73□□□□□ -2.29
HMGB3P21-201ENST00000452483 DNAH6Q9C0G6 4158 aa0.72□□□□□ -2.29
HMGB3P21-201ENST00000452483 DNAH8Q96JB1 4490 aa0.72□□□□□ -2.29
HMGB3P21-201ENST00000452483 SPRR2AP35326 72 aa0.72□□□□□ -2.29
HMGB3P21-201ENST00000452483 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
HMGB3P21-201ENST00000452483 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
HMGB3P21-201ENST00000452483 MT1AP04731 61 aa0.71□□□□□ -2.3
HMGB3P21-201ENST00000452483 LAMA5O15230 3695 aa0.71□□□□□ -2.3
HMGB3P21-201ENST00000452483 SVEP1Q4LDE5 3571 aa0.71□□□□□ -2.3
HMGB3P21-201ENST00000452483 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
HMGB3P21-201ENST00000452483 AKAP9Q99996 3911 aa0.7□□□□□ -2.3
HMGB3P21-201ENST00000452483 ATMQ13315 3056 aa0.7□□□□□ -2.3
HMGB3P21-201ENST00000452483 DNAH9Q9NYC9 4486 aa0.7□□□□□ -2.3
HMGB3P21-201ENST00000452483 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HMGB3P21-201ENST00000452483 MAP1AP78559 2803 aaPredicted RBP0.69□□□□□ -2.3
HMGB3P21-201ENST00000452483 APELAP0DMC3 54 aa0.68□□□□□ -2.3
HMGB3P21-201ENST00000452483 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
HMGB3P21-201ENST00000452483 HTN1P15515 57 aa0.66□□□□□ -2.3
HMGB3P21-201ENST00000452483 DEFB136Q30KP8 78 aa0.66□□□□□ -2.3
HMGB3P21-201ENST00000452483 APOBP04114 4563 aaKnown RBP0.65□□□□□ -2.31
HMGB3P21-201ENST00000452483 LAMA1P25391 3075 aa0.65□□□□□ -2.31
HMGB3P21-201ENST00000452483 VPS13CQ709C8 3753 aa0.65□□□□□ -2.31
HMGB3P21-201ENST00000452483 PKHD1P08F94 4074 aa0.64□□□□□ -2.31
HMGB3P21-201ENST00000452483 DEFB1P60022 68 aa0.64□□□□□ -2.31
HMGB3P21-201ENST00000452483 DNAH1Q9P2D7 4330 aa0.64□□□□□ -2.31
HMGB3P21-201ENST00000452483 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
HMGB3P21-201ENST00000452483 DEFB124Q8NES8 71 aa0.62□□□□□ -2.31
HMGB3P21-201ENST00000452483 SPRR2EP22531 72 aa0.61□□□□□ -2.31
HMGB3P21-201ENST00000452483 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
HMGB3P21-201ENST00000452483 LRP1BQ9NZR2 4599 aa0.61□□□□□ -2.31
HMGB3P21-201ENST00000452483 FAT1Q14517 4588 aa0.58□□□□□ -2.32
HMGB3P21-201ENST00000452483 TRRAPQ9Y4A5 3859 aa0.57□□□□□ -2.32
HMGB3P21-201ENST00000452483 DNAH10Q8IVF4 4471 aa0.56□□□□□ -2.32
HMGB3P21-201ENST00000452483 DEFB133Q30KQ1 61 aa0.56□□□□□ -2.32
HMGB3P21-201ENST00000452483 CMYA5Q8N3K9 4069 aa0.55□□□□□ -2.32
HMGB3P21-201ENST00000452483 LRP2P98164 4655 aa0.54□□□□□ -2.32
HMGB3P21-201ENST00000452483 PLECQ15149 4684 aaKnown RBP0.53□□□□□ -2.32
HMGB3P21-201ENST00000452483 DYNC1H1Q14204 4646 aaKnown RBP0.52□□□□□ -2.33
HMGB3P21-201ENST00000452483 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
HMGB3P21-201ENST00000452483 STARD9Q9P2P6 4700 aa0.46□□□□□ -2.34
HMGB3P21-201ENST00000452483 RPS29P62273 56 aaKnown RBP0.44□□□□□ -2.34
HMGB3P21-201ENST00000452483 DNAH5Q8TE73 4624 aa0.44□□□□□ -2.34
HMGB3P21-201ENST00000452483 A0A096LPF7 62 aa0.43□□□□□ -2.34
HMGB3P21-201ENST00000452483 STATHP02808 62 aa0.42□□□□□ -2.34
HMGB3P21-201ENST00000452483 CD52P31358 61 aa0.42□□□□□ -2.34
HMGB3P21-201ENST00000452483 KRTAP19-6Q3LI70 58 aa0.41□□□□□ -2.34
HMGB3P21-201ENST00000452483 MT1HP80294 61 aa0.4□□□□□ -2.35
HMGB3P21-201ENST00000452483 DNAH17Q9UFH2 4485 aa0.39□□□□□ -2.35
HMGB3P21-201ENST00000452483 LINC01556Q5JQF7 62 aa0.39□□□□□ -2.35
HMGB3P21-201ENST00000452483 MT1EP04732 61 aa0.38□□□□□ -2.35
HMGB3P21-201ENST00000452483 DEFB108BQ8NET1 73 aa0.38□□□□□ -2.35
HMGB3P21-201ENST00000452483 MUC17Q685J3 4493 aa0.35□□□□□ -2.35
HMGB3P21-201ENST00000452483 DEFB4AO15263 64 aa0.35□□□□□ -2.35
HMGB3P21-201ENST00000452483 Q9Y3F1 56 aa0.35□□□□□ -2.35
HMGB3P21-201ENST00000452483 MT1HL1P0DM35 61 aa0.33□□□□□ -2.36
HMGB3P21-201ENST00000452483 MT1LQ93083 61 aa0.33□□□□□ -2.36
HMGB3P21-201ENST00000452483 MT4P47944 62 aa0.31□□□□□ -2.36
HMGB3P21-201ENST00000452483 SPRR2GQ9BYE4 73 aa0.29□□□□□ -2.36
HMGB3P21-201ENST00000452483 KRTAP19-2Q3LHN2 52 aa0.28□□□□□ -2.36
HMGB3P21-201ENST00000452483 KRTAP20-2Q3LI61 65 aa0.26□□□□□ -2.37
HMGB3P21-201ENST00000452483 MT1XP80297 61 aa0.25□□□□□ -2.37
HMGB3P21-201ENST00000452483 COX14Q96I36 57 aa0.23□□□□□ -2.37
HMGB3P21-201ENST00000452483 KRTAP19-7Q3SYF9 63 aa0.22□□□□□ -2.37
HMGB3P21-201ENST00000452483 HTN3P15516 51 aa0.2□□□□□ -2.38
HMGB3P21-201ENST00000452483 MT2AP02795 61 aa0.18□□□□□ -2.38
HMGB3P21-201ENST00000452483 KRTAP19-8Q3LI54 63 aa0.18□□□□□ -2.38
HMGB3P21-201ENST00000452483 MT1FP04733 61 aa0.17□□□□□ -2.38
HMGB3P21-201ENST00000452483 MT1GP13640 62 aa0.14□□□□□ -2.39
HMGB3P21-201ENST00000452483 MT1BP07438 61 aa0.13□□□□□ -2.39
HMGB3P21-201ENST00000452483 KRTAP6-1Q3LI64 71 aa0.08□□□□□ -2.4
HMGB3P21-201ENST00000452483 MT1MQ8N339 61 aa0.03□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 200.2 ms