RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
SEC22C-211ENST00000451653 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
SEC22C-211ENST00000451653 MT3P25713 68 aa2.67□□□□□ -1.98
SEC22C-211ENST00000451653 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
SEC22C-211ENST00000451653 MT1LQ93083 61 aa2.65□□□□□ -1.99
SEC22C-211ENST00000451653 FSIP2Q5CZC0 6907 aa2.65□□□□□ -1.99
SEC22C-211ENST00000451653 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.99
SEC22C-211ENST00000451653 MT1EP04732 61 aa2.64□□□□□ -1.99
SEC22C-211ENST00000451653 MUC2Q02817 5179 aa2.63□□□□□ -1.99
SEC22C-211ENST00000451653 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
SEC22C-211ENST00000451653 LCE2AQ5TA79 106 aaPredicted RBP2.6□□□□□ -1.99
SEC22C-211ENST00000451653 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
SEC22C-211ENST00000451653 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SEC22C-211ENST00000451653 PRM1P04553 51 aa2.58□□□□□ -2
SEC22C-211ENST00000451653 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
SEC22C-211ENST00000451653 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
SEC22C-211ENST00000451653 MT1MQ8N339 61 aa2.55□□□□□ -2
SEC22C-211ENST00000451653 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
SEC22C-211ENST00000451653 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
SEC22C-211ENST00000451653 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
SEC22C-211ENST00000451653 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
SEC22C-211ENST00000451653 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SEC22C-211ENST00000451653 LCE1AQ5T7P2 110 aa2.45□□□□□ -2.02
SEC22C-211ENST00000451653 KRTAP9-7A8MTY7 169 aa2.45□□□□□ -2.02
SEC22C-211ENST00000451653 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
SEC22C-211ENST00000451653 KRTAP4-9Q9BYQ8 210 aa2.38□□□□□ -2.03
SEC22C-211ENST00000451653 MT1AP04731 61 aa2.36□□□□□ -2.03
SEC22C-211ENST00000451653 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.04
SEC22C-211ENST00000451653 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
SEC22C-211ENST00000451653 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
SEC22C-211ENST00000451653 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
SEC22C-211ENST00000451653 KMT2DO14686 5537 aa2.31□□□□□ -2.04
SEC22C-211ENST00000451653 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
SEC22C-211ENST00000451653 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.29□□□□□ -2.04
SEC22C-211ENST00000451653 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
SEC22C-211ENST00000451653 USH2AO75445 5202 aa2.26□□□□□ -2.05
SEC22C-211ENST00000451653 LCE4AQ5TA78 99 aa2.25□□□□□ -2.05
SEC22C-211ENST00000451653 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
SEC22C-211ENST00000451653 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
SEC22C-211ENST00000451653 KRTAP2-2Q9BYT5 123 aa2.22□□□□□ -2.05
SEC22C-211ENST00000451653 KRTAP9-4Q9BYQ2 154 aa2.18□□□□□ -2.06
SEC22C-211ENST00000451653 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
SEC22C-211ENST00000451653 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
SEC22C-211ENST00000451653 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.06
SEC22C-211ENST00000451653 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
SEC22C-211ENST00000451653 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
SEC22C-211ENST00000451653 SSPOA2VEC9 5147 aa2.09□□□□□ -2.07
SEC22C-211ENST00000451653 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
SEC22C-211ENST00000451653 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
SEC22C-211ENST00000451653 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
SEC22C-211ENST00000451653 NEBP20929 6669 aa1.95□□□□□ -2.1
SEC22C-211ENST00000451653 KRTAP4-6Q9BYQ5 205 aa1.94□□□□□ -2.1
SEC22C-211ENST00000451653 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
SEC22C-211ENST00000451653 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
SEC22C-211ENST00000451653 KRTAP4-12Q9BQ66 201 aa1.8□□□□□ -2.12
SEC22C-211ENST00000451653 KRTAP4-2Q9BYR5 136 aa1.8□□□□□ -2.12
SEC22C-211ENST00000451653 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
SEC22C-211ENST00000451653 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
SEC22C-211ENST00000451653 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
SEC22C-211ENST00000451653 KRTAP5-4Q6L8H1 288 aa1.7□□□□□ -2.14
SEC22C-211ENST00000451653 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.14
SEC22C-211ENST00000451653 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
SEC22C-211ENST00000451653 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
SEC22C-211ENST00000451653 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
SEC22C-211ENST00000451653 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
SEC22C-211ENST00000451653 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
SEC22C-211ENST00000451653 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.18
SEC22C-211ENST00000451653 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
SEC22C-211ENST00000451653 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SEC22C-211ENST00000451653 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
SEC22C-211ENST00000451653 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
SEC22C-211ENST00000451653 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
SEC22C-211ENST00000451653 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
SEC22C-211ENST00000451653 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
SEC22C-211ENST00000451653 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
SEC22C-211ENST00000451653 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.22
SEC22C-211ENST00000451653 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
SEC22C-211ENST00000451653 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 113.3 ms