RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 ABCA13Q86UQ4 5058 aa4.01□□□□□ -1.77
SMARCA4-205ENST00000450717 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
SMARCA4-205ENST00000450717 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
SMARCA4-205ENST00000450717 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
SMARCA4-205ENST00000450717 LCE2AQ5TA79 106 aaPredicted RBP3.96□□□□□ -1.77
SMARCA4-205ENST00000450717 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
SMARCA4-205ENST00000450717 PRM1P04553 51 aa3.95□□□□□ -1.78
SMARCA4-205ENST00000450717 MT4P47944 62 aa3.92□□□□□ -1.78
SMARCA4-205ENST00000450717 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
SMARCA4-205ENST00000450717 MT1AP04731 61 aa3.9□□□□□ -1.79
SMARCA4-205ENST00000450717 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
SMARCA4-205ENST00000450717 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
SMARCA4-205ENST00000450717 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
SMARCA4-205ENST00000450717 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
SMARCA4-205ENST00000450717 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
SMARCA4-205ENST00000450717 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
SMARCA4-205ENST00000450717 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
SMARCA4-205ENST00000450717 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
SMARCA4-205ENST00000450717 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
SMARCA4-205ENST00000450717 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
SMARCA4-205ENST00000450717 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
SMARCA4-205ENST00000450717 KRTAP4-9Q9BYQ8 210 aa3.68□□□□□ -1.82
SMARCA4-205ENST00000450717 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
SMARCA4-205ENST00000450717 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
SMARCA4-205ENST00000450717 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
SMARCA4-205ENST00000450717 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SMARCA4-205ENST00000450717 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
SMARCA4-205ENST00000450717 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
SMARCA4-205ENST00000450717 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SMARCA4-205ENST00000450717 MUC2Q02817 5179 aa3.54□□□□□ -1.84
SMARCA4-205ENST00000450717 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
SMARCA4-205ENST00000450717 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
SMARCA4-205ENST00000450717 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
SMARCA4-205ENST00000450717 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
SMARCA4-205ENST00000450717 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
SMARCA4-205ENST00000450717 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SMARCA4-205ENST00000450717 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
SMARCA4-205ENST00000450717 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SMARCA4-205ENST00000450717 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SMARCA4-205ENST00000450717 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SMARCA4-205ENST00000450717 USH2AO75445 5202 aa3.2□□□□□ -1.9
SMARCA4-205ENST00000450717 KMT2DO14686 5537 aa3.16□□□□□ -1.9
SMARCA4-205ENST00000450717 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
SMARCA4-205ENST00000450717 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
SMARCA4-205ENST00000450717 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
SMARCA4-205ENST00000450717 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
SMARCA4-205ENST00000450717 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
SMARCA4-205ENST00000450717 NEBP20929 6669 aa3.02□□□□□ -1.93
SMARCA4-205ENST00000450717 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
SMARCA4-205ENST00000450717 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
SMARCA4-205ENST00000450717 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SMARCA4-205ENST00000450717 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
SMARCA4-205ENST00000450717 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
SMARCA4-205ENST00000450717 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
SMARCA4-205ENST00000450717 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
SMARCA4-205ENST00000450717 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
SMARCA4-205ENST00000450717 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SMARCA4-205ENST00000450717 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SMARCA4-205ENST00000450717 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
SMARCA4-205ENST00000450717 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
SMARCA4-205ENST00000450717 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
SMARCA4-205ENST00000450717 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.02
SMARCA4-205ENST00000450717 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
SMARCA4-205ENST00000450717 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
SMARCA4-205ENST00000450717 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
SMARCA4-205ENST00000450717 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
SMARCA4-205ENST00000450717 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
SMARCA4-205ENST00000450717 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
SMARCA4-205ENST00000450717 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
SMARCA4-205ENST00000450717 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.09
SMARCA4-205ENST00000450717 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
SMARCA4-205ENST00000450717 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
SMARCA4-205ENST00000450717 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
SMARCA4-205ENST00000450717 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
SMARCA4-205ENST00000450717 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SMARCA4-205ENST00000450717 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SMARCA4-205ENST00000450717 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms