RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
SCUBE2-202ENST00000450649 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
SCUBE2-202ENST00000450649 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
SCUBE2-202ENST00000450649 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.52
SCUBE2-202ENST00000450649 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
SCUBE2-202ENST00000450649 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
SCUBE2-202ENST00000450649 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
SCUBE2-202ENST00000450649 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
SCUBE2-202ENST00000450649 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
SCUBE2-202ENST00000450649 MT1GP13640 62 aa5.44□□□□□ -1.54
SCUBE2-202ENST00000450649 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
SCUBE2-202ENST00000450649 MT1MQ8N339 61 aa5.36□□□□□ -1.55
SCUBE2-202ENST00000450649 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
SCUBE2-202ENST00000450649 SYNE2Q8WXH0 6885 aaKnown RBP5.33□□□□□ -1.56
SCUBE2-202ENST00000450649 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SCUBE2-202ENST00000450649 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
SCUBE2-202ENST00000450649 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
SCUBE2-202ENST00000450649 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
SCUBE2-202ENST00000450649 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
SCUBE2-202ENST00000450649 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
SCUBE2-202ENST00000450649 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
SCUBE2-202ENST00000450649 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
SCUBE2-202ENST00000450649 MT1AP04731 61 aa5.03□□□□□ -1.6
SCUBE2-202ENST00000450649 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.61
SCUBE2-202ENST00000450649 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
SCUBE2-202ENST00000450649 PRM1P04553 51 aa4.94□□□□□ -1.62
SCUBE2-202ENST00000450649 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
SCUBE2-202ENST00000450649 KRTAP5-5Q701N2 237 aaPredicted RBP4.93□□□□□ -1.62
SCUBE2-202ENST00000450649 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
SCUBE2-202ENST00000450649 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
SCUBE2-202ENST00000450649 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
SCUBE2-202ENST00000450649 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.66□□□□□ -1.66
SCUBE2-202ENST00000450649 KRTAP5-9P26371 169 aa4.65□□□□□ -1.66
SCUBE2-202ENST00000450649 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.68
SCUBE2-202ENST00000450649 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
SCUBE2-202ENST00000450649 SPRR2EP22531 72 aa4.53□□□□□ -1.68
SCUBE2-202ENST00000450649 SPRR2BP35325 72 aa4.53□□□□□ -1.68
SCUBE2-202ENST00000450649 SPRR2AP35326 72 aa4.53□□□□□ -1.68
SCUBE2-202ENST00000450649 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.7
SCUBE2-202ENST00000450649 MT3P25713 68 aa4.35□□□□□ -1.71
SCUBE2-202ENST00000450649 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SCUBE2-202ENST00000450649 NEBP20929 6669 aa4.15□□□□□ -1.74
SCUBE2-202ENST00000450649 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SCUBE2-202ENST00000450649 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
SCUBE2-202ENST00000450649 MT4P47944 62 aa4.02□□□□□ -1.77
SCUBE2-202ENST00000450649 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SCUBE2-202ENST00000450649 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
SCUBE2-202ENST00000450649 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
SCUBE2-202ENST00000450649 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
SCUBE2-202ENST00000450649 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
SCUBE2-202ENST00000450649 LCE4AQ5TA78 99 aa3.77□□□□□ -1.81
SCUBE2-202ENST00000450649 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
SCUBE2-202ENST00000450649 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
SCUBE2-202ENST00000450649 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
SCUBE2-202ENST00000450649 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
SCUBE2-202ENST00000450649 KRTAP5-3Q6L8H2 238 aa3.64□□□□□ -1.83
SCUBE2-202ENST00000450649 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
SCUBE2-202ENST00000450649 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
SCUBE2-202ENST00000450649 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
SCUBE2-202ENST00000450649 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
SCUBE2-202ENST00000450649 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
SCUBE2-202ENST00000450649 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
SCUBE2-202ENST00000450649 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
SCUBE2-202ENST00000450649 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SCUBE2-202ENST00000450649 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
SCUBE2-202ENST00000450649 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
SCUBE2-202ENST00000450649 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SCUBE2-202ENST00000450649 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
SCUBE2-202ENST00000450649 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
SCUBE2-202ENST00000450649 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
SCUBE2-202ENST00000450649 LCE1FQ5T754 118 aa3□□□□□ -1.93
SCUBE2-202ENST00000450649 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
SCUBE2-202ENST00000450649 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
SCUBE2-202ENST00000450649 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SCUBE2-202ENST00000450649 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
SCUBE2-202ENST00000450649 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SCUBE2-202ENST00000450649 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 51.8 ms