RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
CHD3-205ENST00000449744 GPR98Q8WXG9 6306 aa5.65□□□□□ -1.51
CHD3-205ENST00000449744 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
CHD3-205ENST00000449744 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CHD3-205ENST00000449744 K7ERS5 55 aa5.62□□□□□ -1.51
CHD3-205ENST00000449744 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
CHD3-205ENST00000449744 A8MU10 97 aa5.59□□□□□ -1.51
CHD3-205ENST00000449744 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
CHD3-205ENST00000449744 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
CHD3-205ENST00000449744 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
CHD3-205ENST00000449744 MT1GP13640 62 aa5.53□□□□□ -1.52
CHD3-205ENST00000449744 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
CHD3-205ENST00000449744 TNP1P09430 55 aa5.5□□□□□ -1.53
CHD3-205ENST00000449744 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
CHD3-205ENST00000449744 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
CHD3-205ENST00000449744 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
CHD3-205ENST00000449744 MT1LQ93083 61 aa5.43□□□□□ -1.54
CHD3-205ENST00000449744 MT1MQ8N339 61 aa5.42□□□□□ -1.54
CHD3-205ENST00000449744 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
CHD3-205ENST00000449744 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
CHD3-205ENST00000449744 MT4P47944 62 aa5.33□□□□□ -1.56
CHD3-205ENST00000449744 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
CHD3-205ENST00000449744 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
CHD3-205ENST00000449744 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
CHD3-205ENST00000449744 ROMO1P60602 79 aa5.26□□□□□ -1.57
CHD3-205ENST00000449744 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
CHD3-205ENST00000449744 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
CHD3-205ENST00000449744 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
CHD3-205ENST00000449744 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
CHD3-205ENST00000449744 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
CHD3-205ENST00000449744 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
CHD3-205ENST00000449744 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
CHD3-205ENST00000449744 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
CHD3-205ENST00000449744 SVIPQ8NHG7 77 aa5.01□□□□□ -1.61
CHD3-205ENST00000449744 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
CHD3-205ENST00000449744 KRTAP5-7Q6L8G8 165 aa4.97□□□□□ -1.61
CHD3-205ENST00000449744 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
CHD3-205ENST00000449744 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
CHD3-205ENST00000449744 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
CHD3-205ENST00000449744 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
CHD3-205ENST00000449744 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
CHD3-205ENST00000449744 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
CHD3-205ENST00000449744 KRTAP15-1Q3LI76 137 aa4.89□□□□□ -1.63
CHD3-205ENST00000449744 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CHD3-205ENST00000449744 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
CHD3-205ENST00000449744 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CHD3-205ENST00000449744 MT1AP04731 61 aa4.63□□□□□ -1.67
CHD3-205ENST00000449744 KRTAP6-1Q3LI64 71 aa4.59□□□□□ -1.67
CHD3-205ENST00000449744 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
CHD3-205ENST00000449744 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
CHD3-205ENST00000449744 H3BS24 57 aa4.46□□□□□ -1.7
CHD3-205ENST00000449744 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
CHD3-205ENST00000449744 KRTAP5-8O75690 187 aa4.36□□□□□ -1.71
CHD3-205ENST00000449744 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.72
CHD3-205ENST00000449744 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
CHD3-205ENST00000449744 MUC5BQ9HC84 5762 aaPredicted RBP4.3□□□□□ -1.72
CHD3-205ENST00000449744 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
CHD3-205ENST00000449744 MT3P25713 68 aa4.26□□□□□ -1.73
CHD3-205ENST00000449744 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
CHD3-205ENST00000449744 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CHD3-205ENST00000449744 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
CHD3-205ENST00000449744 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CHD3-205ENST00000449744 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
CHD3-205ENST00000449744 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
CHD3-205ENST00000449744 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
CHD3-205ENST00000449744 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CHD3-205ENST00000449744 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CHD3-205ENST00000449744 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CHD3-205ENST00000449744 INE1O15225 51 aa3.39□□□□□ -1.87
CHD3-205ENST00000449744 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
CHD3-205ENST00000449744 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CHD3-205ENST00000449744 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
CHD3-205ENST00000449744 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
CHD3-205ENST00000449744 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
CHD3-205ENST00000449744 PRM1P04553 51 aa2.71□□□□□ -1.98
CHD3-205ENST00000449744 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
CHD3-205ENST00000449744 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
CHD3-205ENST00000449744 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 207.1 ms