RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 MT1GP13640 62 aa5.48□□□□□ -1.53
SNHG17-207ENST00000449469 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
SNHG17-207ENST00000449469 MT1MQ8N339 61 aa5.44□□□□□ -1.54
SNHG17-207ENST00000449469 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
SNHG17-207ENST00000449469 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
SNHG17-207ENST00000449469 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
SNHG17-207ENST00000449469 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
SNHG17-207ENST00000449469 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
SNHG17-207ENST00000449469 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
SNHG17-207ENST00000449469 FCGBPQ9Y6R7 5405 aaPredicted RBP5.17□□□□□ -1.58
SNHG17-207ENST00000449469 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.58
SNHG17-207ENST00000449469 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
SNHG17-207ENST00000449469 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
SNHG17-207ENST00000449469 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
SNHG17-207ENST00000449469 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
SNHG17-207ENST00000449469 MT1AP04731 61 aa5.04□□□□□ -1.6
SNHG17-207ENST00000449469 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
SNHG17-207ENST00000449469 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
SNHG17-207ENST00000449469 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
SNHG17-207ENST00000449469 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
SNHG17-207ENST00000449469 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SNHG17-207ENST00000449469 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
SNHG17-207ENST00000449469 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
SNHG17-207ENST00000449469 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SNHG17-207ENST00000449469 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
SNHG17-207ENST00000449469 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
SNHG17-207ENST00000449469 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
SNHG17-207ENST00000449469 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
SNHG17-207ENST00000449469 SPRR2EP22531 72 aa4.68□□□□□ -1.66
SNHG17-207ENST00000449469 SPRR2BP35325 72 aa4.68□□□□□ -1.66
SNHG17-207ENST00000449469 SPRR2AP35326 72 aa4.68□□□□□ -1.66
SNHG17-207ENST00000449469 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
SNHG17-207ENST00000449469 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
SNHG17-207ENST00000449469 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
SNHG17-207ENST00000449469 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
SNHG17-207ENST00000449469 PRM1P04553 51 aa4.52□□□□□ -1.69
SNHG17-207ENST00000449469 SPRR2DP22532 72 aa4.49□□□□□ -1.69
SNHG17-207ENST00000449469 MT3P25713 68 aa4.46□□□□□ -1.7
SNHG17-207ENST00000449469 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
SNHG17-207ENST00000449469 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
SNHG17-207ENST00000449469 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
SNHG17-207ENST00000449469 NEBP20929 6669 aa4.23□□□□□ -1.73
SNHG17-207ENST00000449469 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
SNHG17-207ENST00000449469 KRTAP2-2Q9BYT5 123 aa4.02□□□□□ -1.77
SNHG17-207ENST00000449469 LCE4AQ5TA78 99 aa4□□□□□ -1.77
SNHG17-207ENST00000449469 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
SNHG17-207ENST00000449469 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
SNHG17-207ENST00000449469 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SNHG17-207ENST00000449469 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
SNHG17-207ENST00000449469 MT4P47944 62 aa3.86□□□□□ -1.79
SNHG17-207ENST00000449469 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
SNHG17-207ENST00000449469 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
SNHG17-207ENST00000449469 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
SNHG17-207ENST00000449469 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
SNHG17-207ENST00000449469 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
SNHG17-207ENST00000449469 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.83
SNHG17-207ENST00000449469 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
SNHG17-207ENST00000449469 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
SNHG17-207ENST00000449469 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
SNHG17-207ENST00000449469 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SNHG17-207ENST00000449469 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SNHG17-207ENST00000449469 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
SNHG17-207ENST00000449469 KRTAP4-11Q9BYQ6 195 aa3.34□□□□□ -1.87
SNHG17-207ENST00000449469 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
SNHG17-207ENST00000449469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SNHG17-207ENST00000449469 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
SNHG17-207ENST00000449469 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
SNHG17-207ENST00000449469 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
SNHG17-207ENST00000449469 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
SNHG17-207ENST00000449469 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
SNHG17-207ENST00000449469 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
SNHG17-207ENST00000449469 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SNHG17-207ENST00000449469 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
SNHG17-207ENST00000449469 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SNHG17-207ENST00000449469 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
SNHG17-207ENST00000449469 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SNHG17-207ENST00000449469 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SNHG17-207ENST00000449469 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms