RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
BEST1-202ENST00000449131 KRTAP9-7A8MTY7 169 aa2.55□□□□□ -2
BEST1-202ENST00000449131 LOC100996750A0A140TA64 210 aa2.54□□□□□ -2
BEST1-202ENST00000449131 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
BEST1-202ENST00000449131 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
BEST1-202ENST00000449131 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
BEST1-202ENST00000449131 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
BEST1-202ENST00000449131 MT1GP13640 62 aa2.45□□□□□ -2.02
BEST1-202ENST00000449131 KRTAP9-2Q9BYQ4 174 aa2.43□□□□□ -2.02
BEST1-202ENST00000449131 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
BEST1-202ENST00000449131 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
BEST1-202ENST00000449131 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
BEST1-202ENST00000449131 MT1LQ93083 61 aa2.38□□□□□ -2.03
BEST1-202ENST00000449131 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
BEST1-202ENST00000449131 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
BEST1-202ENST00000449131 MT1EP04732 61 aa2.37□□□□□ -2.03
BEST1-202ENST00000449131 SPRR2EP22531 72 aa2.37□□□□□ -2.03
BEST1-202ENST00000449131 SPRR2BP35325 72 aa2.37□□□□□ -2.03
BEST1-202ENST00000449131 SPRR2AP35326 72 aa2.37□□□□□ -2.03
BEST1-202ENST00000449131 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
BEST1-202ENST00000449131 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
BEST1-202ENST00000449131 KRTAP19-6Q3LI70 58 aa2.34□□□□□ -2.03
BEST1-202ENST00000449131 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.04
BEST1-202ENST00000449131 SYNE2Q8WXH0 6885 aaKnown RBP2.34□□□□□ -2.04
BEST1-202ENST00000449131 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
BEST1-202ENST00000449131 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
BEST1-202ENST00000449131 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
BEST1-202ENST00000449131 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
BEST1-202ENST00000449131 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
BEST1-202ENST00000449131 SPRR2DP22532 72 aa2.27□□□□□ -2.05
BEST1-202ENST00000449131 MT1MQ8N339 61 aa2.27□□□□□ -2.05
BEST1-202ENST00000449131 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
BEST1-202ENST00000449131 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
BEST1-202ENST00000449131 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
BEST1-202ENST00000449131 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
BEST1-202ENST00000449131 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
BEST1-202ENST00000449131 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
BEST1-202ENST00000449131 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
BEST1-202ENST00000449131 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.19□□□□□ -2.06
BEST1-202ENST00000449131 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
BEST1-202ENST00000449131 LCE1DQ5T752 114 aa2.14□□□□□ -2.07
BEST1-202ENST00000449131 PRM1P04553 51 aa2.1□□□□□ -2.07
BEST1-202ENST00000449131 MT1AP04731 61 aa2.08□□□□□ -2.08
BEST1-202ENST00000449131 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
BEST1-202ENST00000449131 MT4P47944 62 aa2.05□□□□□ -2.08
BEST1-202ENST00000449131 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
BEST1-202ENST00000449131 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
BEST1-202ENST00000449131 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.09
BEST1-202ENST00000449131 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
BEST1-202ENST00000449131 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
BEST1-202ENST00000449131 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
BEST1-202ENST00000449131 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
BEST1-202ENST00000449131 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
BEST1-202ENST00000449131 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
BEST1-202ENST00000449131 NEBP20929 6669 aa1.84□□□□□ -2.11
BEST1-202ENST00000449131 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
BEST1-202ENST00000449131 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
BEST1-202ENST00000449131 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
BEST1-202ENST00000449131 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
BEST1-202ENST00000449131 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
BEST1-202ENST00000449131 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
BEST1-202ENST00000449131 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
BEST1-202ENST00000449131 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
BEST1-202ENST00000449131 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
BEST1-202ENST00000449131 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
BEST1-202ENST00000449131 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
BEST1-202ENST00000449131 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
BEST1-202ENST00000449131 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
BEST1-202ENST00000449131 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
BEST1-202ENST00000449131 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
BEST1-202ENST00000449131 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
BEST1-202ENST00000449131 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.2
BEST1-202ENST00000449131 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
BEST1-202ENST00000449131 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
BEST1-202ENST00000449131 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
BEST1-202ENST00000449131 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
BEST1-202ENST00000449131 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 74.4 ms