RNA–Protein interactions for RNA: ENST00000448901.1

LINC01247-201, Transcript of long intergenic non-protein coding RNA 1247, humanhuman

TSL 1 (best) BASIC

Gene LINC01247, Length 4,209 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01247-201ENST00000448901 LRP2P98164 4655 aa1.63□□□□□ -2.15
LINC01247-201ENST00000448901 LCE3DQ9BYE3 92 aa1.62□□□□□ -2.15
LINC01247-201ENST00000448901 KRTAP10-5P60370 271 aa1.61□□□□□ -2.15
LINC01247-201ENST00000448901 KRTAP10-7P60409 375 aaPredicted RBP1.6□□□□□ -2.15
LINC01247-201ENST00000448901 HMCN2Q8NDA2 5059 aa1.59□□□□□ -2.15
LINC01247-201ENST00000448901 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
LINC01247-201ENST00000448901 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
LINC01247-201ENST00000448901 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
LINC01247-201ENST00000448901 MT1HL1P0DM35 61 aa1.57□□□□□ -2.16
LINC01247-201ENST00000448901 UBR4Q5T4S7 5183 aa1.56□□□□□ -2.16
LINC01247-201ENST00000448901 KRTAP9-6A8MVA2 160 aa1.54□□□□□ -2.16
LINC01247-201ENST00000448901 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
LINC01247-201ENST00000448901 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.16
LINC01247-201ENST00000448901 RNF213Q63HN8 5207 aa1.51□□□□□ -2.17
LINC01247-201ENST00000448901 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
LINC01247-201ENST00000448901 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
LINC01247-201ENST00000448901 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
LINC01247-201ENST00000448901 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
LINC01247-201ENST00000448901 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
LINC01247-201ENST00000448901 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
LINC01247-201ENST00000448901 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
LINC01247-201ENST00000448901 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
LINC01247-201ENST00000448901 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
LINC01247-201ENST00000448901 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
LINC01247-201ENST00000448901 KRTAP19-5Q3LI72 72 aa1.38□□□□□ -2.19
LINC01247-201ENST00000448901 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
LINC01247-201ENST00000448901 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
LINC01247-201ENST00000448901 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
LINC01247-201ENST00000448901 KMT2DO14686 5537 aa1.34□□□□□ -2.19
LINC01247-201ENST00000448901 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.2
LINC01247-201ENST00000448901 PRM1P04553 51 aa1.31□□□□□ -2.2
LINC01247-201ENST00000448901 MT1HP80294 61 aa1.31□□□□□ -2.2
LINC01247-201ENST00000448901 USH2AO75445 5202 aa1.29□□□□□ -2.2
LINC01247-201ENST00000448901 MT1FP04733 61 aa1.25□□□□□ -2.21
LINC01247-201ENST00000448901 MT2AP02795 61 aa1.25□□□□□ -2.21
LINC01247-201ENST00000448901 SSPOA2VEC9 5147 aa1.25□□□□□ -2.21
LINC01247-201ENST00000448901 SPRR2GQ9BYE4 73 aa1.24□□□□□ -2.21
LINC01247-201ENST00000448901 SPRR2FQ96RM1 72 aa1.23□□□□□ -2.21
LINC01247-201ENST00000448901 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
LINC01247-201ENST00000448901 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
LINC01247-201ENST00000448901 MT1BP07438 61 aa1.2□□□□□ -2.22
LINC01247-201ENST00000448901 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
LINC01247-201ENST00000448901 LCE1BQ5T7P3 118 aa1.2□□□□□ -2.22
LINC01247-201ENST00000448901 FSIP2Q5CZC0 6907 aa1.2□□□□□ -2.22
LINC01247-201ENST00000448901 MT1XP80297 61 aa1.16□□□□□ -2.22
LINC01247-201ENST00000448901 SPRR2EP22531 72 aa1.15□□□□□ -2.22
LINC01247-201ENST00000448901 SPRR2BP35325 72 aa1.15□□□□□ -2.22
LINC01247-201ENST00000448901 SPRR2AP35326 72 aa1.15□□□□□ -2.22
LINC01247-201ENST00000448901 KRTAP20-1Q3LI63 56 aa1.15□□□□□ -2.22
LINC01247-201ENST00000448901 AHNAKQ09666 5890 aaKnown RBP1.14□□□□□ -2.23
LINC01247-201ENST00000448901 SPRR2DP22532 72 aa1.12□□□□□ -2.23
LINC01247-201ENST00000448901 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
LINC01247-201ENST00000448901 NEBP20929 6669 aa1.12□□□□□ -2.23
LINC01247-201ENST00000448901 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
LINC01247-201ENST00000448901 MT1GP13640 62 aa1.11□□□□□ -2.23
LINC01247-201ENST00000448901 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
LINC01247-201ENST00000448901 KRTAP19-7Q3SYF9 63 aa1.1□□□□□ -2.23
LINC01247-201ENST00000448901 MT1AP04731 61 aa1.09□□□□□ -2.24
LINC01247-201ENST00000448901 MUC12Q9UKN1 5478 aa1.08□□□□□ -2.24
LINC01247-201ENST00000448901 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
LINC01247-201ENST00000448901 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
LINC01247-201ENST00000448901 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
LINC01247-201ENST00000448901 KRTAP4-3Q9BYR4 195 aa1.04□□□□□ -2.24
LINC01247-201ENST00000448901 MT1LQ93083 61 aa1.03□□□□□ -2.25
LINC01247-201ENST00000448901 MT1EP04732 61 aa1□□□□□ -2.25
LINC01247-201ENST00000448901 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
LINC01247-201ENST00000448901 MT1MQ8N339 61 aa0.97□□□□□ -2.25
LINC01247-201ENST00000448901 MT4P47944 62 aa0.97□□□□□ -2.25
LINC01247-201ENST00000448901 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
LINC01247-201ENST00000448901 KRTAP5-7Q6L8G8 165 aa0.91□□□□□ -2.26
LINC01247-201ENST00000448901 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
LINC01247-201ENST00000448901 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
LINC01247-201ENST00000448901 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
LINC01247-201ENST00000448901 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
LINC01247-201ENST00000448901 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
LINC01247-201ENST00000448901 PHGR1C9JFL3 82 aa0.59□□□□□ -2.32
LINC01247-201ENST00000448901 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms