RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
SCAP-208ENST00000448217 MT1LQ93083 61 aa4.27□□□□□ -1.73
SCAP-208ENST00000448217 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SCAP-208ENST00000448217 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
SCAP-208ENST00000448217 MT1GP13640 62 aa4.22□□□□□ -1.73
SCAP-208ENST00000448217 SPRR2EP22531 72 aa4.22□□□□□ -1.73
SCAP-208ENST00000448217 SPRR2BP35325 72 aa4.22□□□□□ -1.73
SCAP-208ENST00000448217 SPRR2AP35326 72 aa4.22□□□□□ -1.73
SCAP-208ENST00000448217 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
SCAP-208ENST00000448217 NEBP20929 6669 aa4.19□□□□□ -1.74
SCAP-208ENST00000448217 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SCAP-208ENST00000448217 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
SCAP-208ENST00000448217 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
SCAP-208ENST00000448217 SPRR2DP22532 72 aa4.08□□□□□ -1.76
SCAP-208ENST00000448217 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SCAP-208ENST00000448217 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
SCAP-208ENST00000448217 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
SCAP-208ENST00000448217 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
SCAP-208ENST00000448217 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
SCAP-208ENST00000448217 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
SCAP-208ENST00000448217 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
SCAP-208ENST00000448217 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
SCAP-208ENST00000448217 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SCAP-208ENST00000448217 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
SCAP-208ENST00000448217 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
SCAP-208ENST00000448217 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
SCAP-208ENST00000448217 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
SCAP-208ENST00000448217 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
SCAP-208ENST00000448217 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
SCAP-208ENST00000448217 MT1AP04731 61 aa3.65□□□□□ -1.83
SCAP-208ENST00000448217 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
SCAP-208ENST00000448217 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SCAP-208ENST00000448217 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
SCAP-208ENST00000448217 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
SCAP-208ENST00000448217 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
SCAP-208ENST00000448217 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
SCAP-208ENST00000448217 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
SCAP-208ENST00000448217 MT4P47944 62 aa3.5□□□□□ -1.85
SCAP-208ENST00000448217 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
SCAP-208ENST00000448217 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SCAP-208ENST00000448217 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
SCAP-208ENST00000448217 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SCAP-208ENST00000448217 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
SCAP-208ENST00000448217 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SCAP-208ENST00000448217 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SCAP-208ENST00000448217 MT3P25713 68 aa3.31□□□□□ -1.88
SCAP-208ENST00000448217 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
SCAP-208ENST00000448217 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
SCAP-208ENST00000448217 GPR98Q8WXG9 6306 aa3.05□□□□□ -1.92
SCAP-208ENST00000448217 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SCAP-208ENST00000448217 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
SCAP-208ENST00000448217 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
SCAP-208ENST00000448217 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
SCAP-208ENST00000448217 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
SCAP-208ENST00000448217 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
SCAP-208ENST00000448217 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
SCAP-208ENST00000448217 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
SCAP-208ENST00000448217 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
SCAP-208ENST00000448217 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SCAP-208ENST00000448217 INE1O15225 51 aa2.84□□□□□ -1.95
SCAP-208ENST00000448217 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SCAP-208ENST00000448217 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SCAP-208ENST00000448217 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
SCAP-208ENST00000448217 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
SCAP-208ENST00000448217 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
SCAP-208ENST00000448217 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
SCAP-208ENST00000448217 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SCAP-208ENST00000448217 H3BS24 57 aa2.55□□□□□ -2
SCAP-208ENST00000448217 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SCAP-208ENST00000448217 PRM1P04553 51 aa2.43□□□□□ -2.02
SCAP-208ENST00000448217 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SCAP-208ENST00000448217 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
SCAP-208ENST00000448217 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
SCAP-208ENST00000448217 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
SCAP-208ENST00000448217 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
SCAP-208ENST00000448217 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
SCAP-208ENST00000448217 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
SCAP-208ENST00000448217 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 71.9 ms