RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
SNHG4-201ENST00000448190 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
SNHG4-201ENST00000448190 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
SNHG4-201ENST00000448190 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
SNHG4-201ENST00000448190 MT1GP13640 62 aa4.76□□□□□ -1.65
SNHG4-201ENST00000448190 MT1LQ93083 61 aa4.76□□□□□ -1.65
SNHG4-201ENST00000448190 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SNHG4-201ENST00000448190 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SNHG4-201ENST00000448190 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
SNHG4-201ENST00000448190 MT1MQ8N339 61 aa4.7□□□□□ -1.66
SNHG4-201ENST00000448190 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
SNHG4-201ENST00000448190 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
SNHG4-201ENST00000448190 ROMO1P60602 79 aa4.65□□□□□ -1.67
SNHG4-201ENST00000448190 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SNHG4-201ENST00000448190 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
SNHG4-201ENST00000448190 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
SNHG4-201ENST00000448190 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
SNHG4-201ENST00000448190 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
SNHG4-201ENST00000448190 MT4P47944 62 aa4.39□□□□□ -1.71
SNHG4-201ENST00000448190 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
SNHG4-201ENST00000448190 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
SNHG4-201ENST00000448190 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
SNHG4-201ENST00000448190 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
SNHG4-201ENST00000448190 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
SNHG4-201ENST00000448190 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
SNHG4-201ENST00000448190 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
SNHG4-201ENST00000448190 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SNHG4-201ENST00000448190 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
SNHG4-201ENST00000448190 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SNHG4-201ENST00000448190 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
SNHG4-201ENST00000448190 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
SNHG4-201ENST00000448190 H3BS24 57 aa4.19□□□□□ -1.74
SNHG4-201ENST00000448190 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SNHG4-201ENST00000448190 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
SNHG4-201ENST00000448190 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
SNHG4-201ENST00000448190 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
SNHG4-201ENST00000448190 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
SNHG4-201ENST00000448190 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SNHG4-201ENST00000448190 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
SNHG4-201ENST00000448190 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
SNHG4-201ENST00000448190 MT1AP04731 61 aa4.04□□□□□ -1.76
SNHG4-201ENST00000448190 A0A0A0MQY5 61 aa4□□□□□ -1.77
SNHG4-201ENST00000448190 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
SNHG4-201ENST00000448190 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
SNHG4-201ENST00000448190 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
SNHG4-201ENST00000448190 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
SNHG4-201ENST00000448190 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SNHG4-201ENST00000448190 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
SNHG4-201ENST00000448190 KRTAP5-7Q6L8G8 165 aa3.73□□□□□ -1.81
SNHG4-201ENST00000448190 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SNHG4-201ENST00000448190 MT3P25713 68 aa3.69□□□□□ -1.82
SNHG4-201ENST00000448190 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
SNHG4-201ENST00000448190 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
SNHG4-201ENST00000448190 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SNHG4-201ENST00000448190 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SNHG4-201ENST00000448190 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SNHG4-201ENST00000448190 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
SNHG4-201ENST00000448190 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
SNHG4-201ENST00000448190 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
SNHG4-201ENST00000448190 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SNHG4-201ENST00000448190 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SNHG4-201ENST00000448190 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
SNHG4-201ENST00000448190 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SNHG4-201ENST00000448190 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
SNHG4-201ENST00000448190 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
SNHG4-201ENST00000448190 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
SNHG4-201ENST00000448190 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
SNHG4-201ENST00000448190 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
SNHG4-201ENST00000448190 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SNHG4-201ENST00000448190 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SNHG4-201ENST00000448190 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
SNHG4-201ENST00000448190 INE1O15225 51 aa2.58□□□□□ -2
SNHG4-201ENST00000448190 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
SNHG4-201ENST00000448190 PRM1P04553 51 aa2.42□□□□□ -2.02
SNHG4-201ENST00000448190 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SNHG4-201ENST00000448190 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
SNHG4-201ENST00000448190 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
SNHG4-201ENST00000448190 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms