RNA–Protein interactions for RNA: ENST00000447712.6

FGFR1-214, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR1, Length 5,900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-214ENST00000447712 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
FGFR1-214ENST00000447712 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
FGFR1-214ENST00000447712 PRM1P04553 51 aa6.12□□□□□ -1.43
FGFR1-214ENST00000447712 KMT2CQ8NEZ4 4911 aaKnown RBP6.09□□□□□ -1.44
FGFR1-214ENST00000447712 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
FGFR1-214ENST00000447712 TNXBP22105 4242 aa6□□□□□ -1.45
FGFR1-214ENST00000447712 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
FGFR1-214ENST00000447712 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
FGFR1-214ENST00000447712 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
FGFR1-214ENST00000447712 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
FGFR1-214ENST00000447712 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
FGFR1-214ENST00000447712 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
FGFR1-214ENST00000447712 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
FGFR1-214ENST00000447712 MT1AP04731 61 aa5.82□□□□□ -1.48
FGFR1-214ENST00000447712 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
FGFR1-214ENST00000447712 SYNE2Q8WXH0 6885 aaKnown RBP5.76□□□□□ -1.49
FGFR1-214ENST00000447712 KRTAP19-7Q3SYF9 63 aa5.75□□□□□ -1.49
FGFR1-214ENST00000447712 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
FGFR1-214ENST00000447712 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
FGFR1-214ENST00000447712 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
FGFR1-214ENST00000447712 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
FGFR1-214ENST00000447712 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
FGFR1-214ENST00000447712 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
FGFR1-214ENST00000447712 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
FGFR1-214ENST00000447712 MUC2Q02817 5179 aa5.6□□□□□ -1.51
FGFR1-214ENST00000447712 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.51
FGFR1-214ENST00000447712 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
FGFR1-214ENST00000447712 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
FGFR1-214ENST00000447712 LCE1FQ5T754 118 aa5.56□□□□□ -1.52
FGFR1-214ENST00000447712 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
FGFR1-214ENST00000447712 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
FGFR1-214ENST00000447712 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
FGFR1-214ENST00000447712 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
FGFR1-214ENST00000447712 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
FGFR1-214ENST00000447712 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
FGFR1-214ENST00000447712 LCE4AQ5TA78 99 aa5.46□□□□□ -1.54
FGFR1-214ENST00000447712 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
FGFR1-214ENST00000447712 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
FGFR1-214ENST00000447712 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
FGFR1-214ENST00000447712 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
FGFR1-214ENST00000447712 USH2AO75445 5202 aa4.8□□□□□ -1.64
FGFR1-214ENST00000447712 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
FGFR1-214ENST00000447712 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
FGFR1-214ENST00000447712 NEBP20929 6669 aa4.72□□□□□ -1.65
FGFR1-214ENST00000447712 MACF1Q9UPN3 7388 aaKnown RBP4.68□□□□□ -1.66
FGFR1-214ENST00000447712 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.66
FGFR1-214ENST00000447712 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
FGFR1-214ENST00000447712 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
FGFR1-214ENST00000447712 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
FGFR1-214ENST00000447712 KMT2DO14686 5537 aa4.48□□□□□ -1.69
FGFR1-214ENST00000447712 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
FGFR1-214ENST00000447712 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
FGFR1-214ENST00000447712 KRTAP4-4Q9BYR3 166 aa4.42□□□□□ -1.7
FGFR1-214ENST00000447712 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
FGFR1-214ENST00000447712 MUC19Q7Z5P9 8384 aa4.18□□□□□ -1.74
FGFR1-214ENST00000447712 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
FGFR1-214ENST00000447712 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
FGFR1-214ENST00000447712 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
FGFR1-214ENST00000447712 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
FGFR1-214ENST00000447712 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
FGFR1-214ENST00000447712 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
FGFR1-214ENST00000447712 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
FGFR1-214ENST00000447712 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
FGFR1-214ENST00000447712 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
FGFR1-214ENST00000447712 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
FGFR1-214ENST00000447712 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
FGFR1-214ENST00000447712 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.93
FGFR1-214ENST00000447712 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
FGFR1-214ENST00000447712 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
FGFR1-214ENST00000447712 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
FGFR1-214ENST00000447712 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
FGFR1-214ENST00000447712 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
FGFR1-214ENST00000447712 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
FGFR1-214ENST00000447712 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-214ENST00000447712 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
FGFR1-214ENST00000447712 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
FGFR1-214ENST00000447712 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms