RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 KRTAP9-7A8MTY7 169 aa2.22□□□□□ -2.05
PROM1-201ENST00000447510 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
PROM1-201ENST00000447510 KMT2DO14686 5537 aa2.18□□□□□ -2.06
PROM1-201ENST00000447510 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
PROM1-201ENST00000447510 SPRR2EP22531 72 aa2.17□□□□□ -2.06
PROM1-201ENST00000447510 SPRR2BP35325 72 aa2.17□□□□□ -2.06
PROM1-201ENST00000447510 SPRR2AP35326 72 aa2.17□□□□□ -2.06
PROM1-201ENST00000447510 MT3P25713 68 aa2.12□□□□□ -2.07
PROM1-201ENST00000447510 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
PROM1-201ENST00000447510 KRTAP9-4Q9BYQ2 154 aa2.11□□□□□ -2.07
PROM1-201ENST00000447510 MT1EP04732 61 aa2.1□□□□□ -2.07
PROM1-201ENST00000447510 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
PROM1-201ENST00000447510 SPRR2DP22532 72 aa2.09□□□□□ -2.07
PROM1-201ENST00000447510 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
PROM1-201ENST00000447510 LCE3CQ5T5A8 94 aa2.09□□□□□ -2.08
PROM1-201ENST00000447510 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
PROM1-201ENST00000447510 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
PROM1-201ENST00000447510 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
PROM1-201ENST00000447510 MT1GP13640 62 aa2.06□□□□□ -2.08
PROM1-201ENST00000447510 LCE3BQ5TA77 95 aa2.06□□□□□ -2.08
PROM1-201ENST00000447510 LCE1AQ5T7P2 110 aa2.05□□□□□ -2.08
PROM1-201ENST00000447510 MT1LQ93083 61 aa2.05□□□□□ -2.08
PROM1-201ENST00000447510 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
PROM1-201ENST00000447510 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
PROM1-201ENST00000447510 NEBP20929 6669 aa2.04□□□□□ -2.08
PROM1-201ENST00000447510 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
PROM1-201ENST00000447510 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
PROM1-201ENST00000447510 KRTAP9-6A8MVA2 160 aa2.03□□□□□ -2.08
PROM1-201ENST00000447510 MT1MQ8N339 61 aa2□□□□□ -2.09
PROM1-201ENST00000447510 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
PROM1-201ENST00000447510 LCE5AQ5TCM9 118 aa1.99□□□□□ -2.09
PROM1-201ENST00000447510 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PROM1-201ENST00000447510 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
PROM1-201ENST00000447510 KRTAP2-3P0C7H8 128 aa1.97□□□□□ -2.09
PROM1-201ENST00000447510 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
PROM1-201ENST00000447510 KRTAP2-4Q9BYR9 128 aa1.97□□□□□ -2.09
PROM1-201ENST00000447510 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
PROM1-201ENST00000447510 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
PROM1-201ENST00000447510 KRTAP2-2Q9BYT5 123 aa1.91□□□□□ -2.1
PROM1-201ENST00000447510 MT4P47944 62 aa1.84□□□□□ -2.12
PROM1-201ENST00000447510 KRTAP4-9Q9BYQ8 210 aa1.83□□□□□ -2.12
PROM1-201ENST00000447510 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
PROM1-201ENST00000447510 KRTAP4-2Q9BYR5 136 aa1.82□□□□□ -2.12
PROM1-201ENST00000447510 PRM1P04553 51 aa1.78□□□□□ -2.12
PROM1-201ENST00000447510 MT1AP04731 61 aa1.76□□□□□ -2.13
PROM1-201ENST00000447510 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
PROM1-201ENST00000447510 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
PROM1-201ENST00000447510 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
PROM1-201ENST00000447510 LCE1FQ5T754 118 aa1.71□□□□□ -2.14
PROM1-201ENST00000447510 LCE3EQ5T5B0 92 aa1.7□□□□□ -2.14
PROM1-201ENST00000447510 KRTAP5-5Q701N2 237 aaPredicted RBP1.7□□□□□ -2.14
PROM1-201ENST00000447510 KRTAP5-4Q6L8H1 288 aa1.69□□□□□ -2.14
PROM1-201ENST00000447510 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
PROM1-201ENST00000447510 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
PROM1-201ENST00000447510 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
PROM1-201ENST00000447510 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
PROM1-201ENST00000447510 LCE1EQ5T753 118 aa1.61□□□□□ -2.15
PROM1-201ENST00000447510 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.15
PROM1-201ENST00000447510 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
PROM1-201ENST00000447510 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
PROM1-201ENST00000447510 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
PROM1-201ENST00000447510 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
PROM1-201ENST00000447510 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
PROM1-201ENST00000447510 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
PROM1-201ENST00000447510 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
PROM1-201ENST00000447510 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
PROM1-201ENST00000447510 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
PROM1-201ENST00000447510 KRTAP5-8O75690 187 aa1.37□□□□□ -2.19
PROM1-201ENST00000447510 KRTAP5-1Q6L8H4 278 aa1.32□□□□□ -2.2
PROM1-201ENST00000447510 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.3□□□□□ -2.2
PROM1-201ENST00000447510 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
PROM1-201ENST00000447510 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
PROM1-201ENST00000447510 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
PROM1-201ENST00000447510 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
PROM1-201ENST00000447510 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
PROM1-201ENST00000447510 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
PROM1-201ENST00000447510 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 114.1 ms