RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 MT1HP80294 61 aa3.03□□□□□ -1.92
MCF2L2-203ENST00000447025 MT3P25713 68 aa3.03□□□□□ -1.92
MCF2L2-203ENST00000447025 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
MCF2L2-203ENST00000447025 KRTAP12-3P60328 96 aa3□□□□□ -1.93
MCF2L2-203ENST00000447025 LCE1DQ5T752 114 aa3□□□□□ -1.93
MCF2L2-203ENST00000447025 NEBP20929 6669 aa2.98□□□□□ -1.93
MCF2L2-203ENST00000447025 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
MCF2L2-203ENST00000447025 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
MCF2L2-203ENST00000447025 KRTAP9-8Q9BYQ0 159 aa2.92□□□□□ -1.94
MCF2L2-203ENST00000447025 MT1FP04733 61 aa2.91□□□□□ -1.94
MCF2L2-203ENST00000447025 MT2AP02795 61 aa2.9□□□□□ -1.95
MCF2L2-203ENST00000447025 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
MCF2L2-203ENST00000447025 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
MCF2L2-203ENST00000447025 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
MCF2L2-203ENST00000447025 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
MCF2L2-203ENST00000447025 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
MCF2L2-203ENST00000447025 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
MCF2L2-203ENST00000447025 KMT2DO14686 5537 aa2.79□□□□□ -1.96
MCF2L2-203ENST00000447025 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
MCF2L2-203ENST00000447025 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
MCF2L2-203ENST00000447025 SPRR2GQ9BYE4 73 aa2.75□□□□□ -1.97
MCF2L2-203ENST00000447025 KRTAP19-5Q3LI72 72 aa2.73□□□□□ -1.97
MCF2L2-203ENST00000447025 MT1BP07438 61 aa2.72□□□□□ -1.97
MCF2L2-203ENST00000447025 PRM1P04553 51 aa2.71□□□□□ -1.98
MCF2L2-203ENST00000447025 KRTAP4-8A0A0G2JLE6 195 aa2.69□□□□□ -1.98
MCF2L2-203ENST00000447025 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
MCF2L2-203ENST00000447025 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
MCF2L2-203ENST00000447025 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
MCF2L2-203ENST00000447025 MT1XP80297 61 aa2.62□□□□□ -1.99
MCF2L2-203ENST00000447025 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
MCF2L2-203ENST00000447025 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
MCF2L2-203ENST00000447025 MUC12Q9UKN1 5478 aa2.56□□□□□ -2
MCF2L2-203ENST00000447025 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
MCF2L2-203ENST00000447025 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
MCF2L2-203ENST00000447025 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
MCF2L2-203ENST00000447025 SPRR2EP22531 72 aa2.49□□□□□ -2.01
MCF2L2-203ENST00000447025 SPRR2BP35325 72 aa2.49□□□□□ -2.01
MCF2L2-203ENST00000447025 SPRR2AP35326 72 aa2.49□□□□□ -2.01
MCF2L2-203ENST00000447025 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
MCF2L2-203ENST00000447025 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
MCF2L2-203ENST00000447025 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
MCF2L2-203ENST00000447025 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
MCF2L2-203ENST00000447025 MT1AP04731 61 aa2.44□□□□□ -2.02
MCF2L2-203ENST00000447025 SPRR2DP22532 72 aa2.44□□□□□ -2.02
MCF2L2-203ENST00000447025 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
MCF2L2-203ENST00000447025 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
MCF2L2-203ENST00000447025 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
MCF2L2-203ENST00000447025 SPRR2FQ96RM1 72 aa2.34□□□□□ -2.03
MCF2L2-203ENST00000447025 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
MCF2L2-203ENST00000447025 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
MCF2L2-203ENST00000447025 MT1EP04732 61 aa2.31□□□□□ -2.04
MCF2L2-203ENST00000447025 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
MCF2L2-203ENST00000447025 MT1LQ93083 61 aa2.27□□□□□ -2.05
MCF2L2-203ENST00000447025 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
MCF2L2-203ENST00000447025 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
MCF2L2-203ENST00000447025 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
MCF2L2-203ENST00000447025 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
MCF2L2-203ENST00000447025 MT1MQ8N339 61 aa2.15□□□□□ -2.07
MCF2L2-203ENST00000447025 MT1GP13640 62 aa2.12□□□□□ -2.07
MCF2L2-203ENST00000447025 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
MCF2L2-203ENST00000447025 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
MCF2L2-203ENST00000447025 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
MCF2L2-203ENST00000447025 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
MCF2L2-203ENST00000447025 MT4P47944 62 aa2.04□□□□□ -2.08
MCF2L2-203ENST00000447025 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
MCF2L2-203ENST00000447025 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
MCF2L2-203ENST00000447025 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
MCF2L2-203ENST00000447025 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
MCF2L2-203ENST00000447025 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
MCF2L2-203ENST00000447025 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
MCF2L2-203ENST00000447025 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
MCF2L2-203ENST00000447025 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
MCF2L2-203ENST00000447025 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
MCF2L2-203ENST00000447025 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
MCF2L2-203ENST00000447025 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
MCF2L2-203ENST00000447025 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
MCF2L2-203ENST00000447025 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 170.6 ms