RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 MT4P47944 62 aa3.57□□□□□ -1.84
NFRKB-201ENST00000446488 MUC2Q02817 5179 aa3.56□□□□□ -1.84
NFRKB-201ENST00000446488 RNF213Q63HN8 5207 aa3.56□□□□□ -1.84
NFRKB-201ENST00000446488 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
NFRKB-201ENST00000446488 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
NFRKB-201ENST00000446488 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
NFRKB-201ENST00000446488 MT1MQ8N339 61 aa3.53□□□□□ -1.84
NFRKB-201ENST00000446488 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
NFRKB-201ENST00000446488 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
NFRKB-201ENST00000446488 MT3P25713 68 aa3.5□□□□□ -1.85
NFRKB-201ENST00000446488 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
NFRKB-201ENST00000446488 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.85
NFRKB-201ENST00000446488 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.85
NFRKB-201ENST00000446488 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
NFRKB-201ENST00000446488 HMCN2Q8NDA2 5059 aa3.45□□□□□ -1.86
NFRKB-201ENST00000446488 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
NFRKB-201ENST00000446488 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
NFRKB-201ENST00000446488 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
NFRKB-201ENST00000446488 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
NFRKB-201ENST00000446488 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
NFRKB-201ENST00000446488 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
NFRKB-201ENST00000446488 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
NFRKB-201ENST00000446488 PRM1P04553 51 aa3.29□□□□□ -1.88
NFRKB-201ENST00000446488 MT1AP04731 61 aa3.29□□□□□ -1.88
NFRKB-201ENST00000446488 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
NFRKB-201ENST00000446488 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
NFRKB-201ENST00000446488 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
NFRKB-201ENST00000446488 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
NFRKB-201ENST00000446488 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
NFRKB-201ENST00000446488 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
NFRKB-201ENST00000446488 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
NFRKB-201ENST00000446488 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
NFRKB-201ENST00000446488 USH2AO75445 5202 aa3.08□□□□□ -1.92
NFRKB-201ENST00000446488 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
NFRKB-201ENST00000446488 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
NFRKB-201ENST00000446488 KMT2DO14686 5537 aa3□□□□□ -1.93
NFRKB-201ENST00000446488 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
NFRKB-201ENST00000446488 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
NFRKB-201ENST00000446488 NEBP20929 6669 aa2.98□□□□□ -1.93
NFRKB-201ENST00000446488 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
NFRKB-201ENST00000446488 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
NFRKB-201ENST00000446488 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
NFRKB-201ENST00000446488 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
NFRKB-201ENST00000446488 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
NFRKB-201ENST00000446488 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
NFRKB-201ENST00000446488 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
NFRKB-201ENST00000446488 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NFRKB-201ENST00000446488 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
NFRKB-201ENST00000446488 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
NFRKB-201ENST00000446488 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
NFRKB-201ENST00000446488 MDN1Q9NU22 5596 aa2.68□□□□□ -1.98
NFRKB-201ENST00000446488 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
NFRKB-201ENST00000446488 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
NFRKB-201ENST00000446488 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
NFRKB-201ENST00000446488 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
NFRKB-201ENST00000446488 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
NFRKB-201ENST00000446488 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
NFRKB-201ENST00000446488 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
NFRKB-201ENST00000446488 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
NFRKB-201ENST00000446488 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
NFRKB-201ENST00000446488 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
NFRKB-201ENST00000446488 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
NFRKB-201ENST00000446488 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
NFRKB-201ENST00000446488 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
NFRKB-201ENST00000446488 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
NFRKB-201ENST00000446488 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
NFRKB-201ENST00000446488 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
NFRKB-201ENST00000446488 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
NFRKB-201ENST00000446488 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
NFRKB-201ENST00000446488 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
NFRKB-201ENST00000446488 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
NFRKB-201ENST00000446488 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
NFRKB-201ENST00000446488 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
NFRKB-201ENST00000446488 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
NFRKB-201ENST00000446488 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
NFRKB-201ENST00000446488 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
NFRKB-201ENST00000446488 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.3 ms