RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
UBXN2A-203ENST00000446425 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
UBXN2A-203ENST00000446425 MT1GP13640 62 aa5.29□□□□□ -1.56
UBXN2A-203ENST00000446425 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
UBXN2A-203ENST00000446425 MT1MQ8N339 61 aa5.18□□□□□ -1.58
UBXN2A-203ENST00000446425 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
UBXN2A-203ENST00000446425 SSPOA2VEC9 5147 aa5.13□□□□□ -1.59
UBXN2A-203ENST00000446425 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
UBXN2A-203ENST00000446425 MT1AP04731 61 aa5.05□□□□□ -1.6
UBXN2A-203ENST00000446425 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
UBXN2A-203ENST00000446425 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
UBXN2A-203ENST00000446425 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
UBXN2A-203ENST00000446425 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
UBXN2A-203ENST00000446425 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
UBXN2A-203ENST00000446425 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
UBXN2A-203ENST00000446425 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
UBXN2A-203ENST00000446425 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
UBXN2A-203ENST00000446425 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
UBXN2A-203ENST00000446425 PRM1P04553 51 aa4.87□□□□□ -1.63
UBXN2A-203ENST00000446425 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
UBXN2A-203ENST00000446425 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
UBXN2A-203ENST00000446425 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
UBXN2A-203ENST00000446425 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
UBXN2A-203ENST00000446425 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
UBXN2A-203ENST00000446425 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.65
UBXN2A-203ENST00000446425 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
UBXN2A-203ENST00000446425 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
UBXN2A-203ENST00000446425 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
UBXN2A-203ENST00000446425 KRTAP4-12Q9BQ66 201 aa4.58□□□□□ -1.68
UBXN2A-203ENST00000446425 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
UBXN2A-203ENST00000446425 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
UBXN2A-203ENST00000446425 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
UBXN2A-203ENST00000446425 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
UBXN2A-203ENST00000446425 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
UBXN2A-203ENST00000446425 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
UBXN2A-203ENST00000446425 LCE4AQ5TA78 99 aa4.34□□□□□ -1.72
UBXN2A-203ENST00000446425 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
UBXN2A-203ENST00000446425 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
UBXN2A-203ENST00000446425 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
UBXN2A-203ENST00000446425 MT3P25713 68 aa4.23□□□□□ -1.73
UBXN2A-203ENST00000446425 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
UBXN2A-203ENST00000446425 SPRR2AP35326 72 aa4.22□□□□□ -1.73
UBXN2A-203ENST00000446425 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
UBXN2A-203ENST00000446425 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
UBXN2A-203ENST00000446425 SPRR2EP22531 72 aa4.14□□□□□ -1.75
UBXN2A-203ENST00000446425 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
UBXN2A-203ENST00000446425 SPRR2BP35325 72 aa4.08□□□□□ -1.76
UBXN2A-203ENST00000446425 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
UBXN2A-203ENST00000446425 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
UBXN2A-203ENST00000446425 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
UBXN2A-203ENST00000446425 SPRR2DP22532 72 aa3.89□□□□□ -1.79
UBXN2A-203ENST00000446425 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
UBXN2A-203ENST00000446425 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
UBXN2A-203ENST00000446425 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
UBXN2A-203ENST00000446425 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
UBXN2A-203ENST00000446425 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
UBXN2A-203ENST00000446425 MT4P47944 62 aa3.42□□□□□ -1.86
UBXN2A-203ENST00000446425 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
UBXN2A-203ENST00000446425 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
UBXN2A-203ENST00000446425 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
UBXN2A-203ENST00000446425 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
UBXN2A-203ENST00000446425 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
UBXN2A-203ENST00000446425 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.9
UBXN2A-203ENST00000446425 NEBP20929 6669 aa3.15□□□□□ -1.91
UBXN2A-203ENST00000446425 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
UBXN2A-203ENST00000446425 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
UBXN2A-203ENST00000446425 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
UBXN2A-203ENST00000446425 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
UBXN2A-203ENST00000446425 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
UBXN2A-203ENST00000446425 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
UBXN2A-203ENST00000446425 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
UBXN2A-203ENST00000446425 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
UBXN2A-203ENST00000446425 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
UBXN2A-203ENST00000446425 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
UBXN2A-203ENST00000446425 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
UBXN2A-203ENST00000446425 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
UBXN2A-203ENST00000446425 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
UBXN2A-203ENST00000446425 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 84.4 ms