RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
TIMP1-204ENST00000445623 NEBP20929 6669 aa4.82□□□□□ -1.64
TIMP1-204ENST00000445623 KRTAP19-3Q7Z4W3 81 aa4.75□□□□□ -1.65
TIMP1-204ENST00000445623 SPRR2DP22532 72 aa4.7□□□□□ -1.66
TIMP1-204ENST00000445623 MT1LQ93083 61 aa4.7□□□□□ -1.66
TIMP1-204ENST00000445623 MT1GP13640 62 aa4.69□□□□□ -1.66
TIMP1-204ENST00000445623 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
TIMP1-204ENST00000445623 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
TIMP1-204ENST00000445623 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
TIMP1-204ENST00000445623 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
TIMP1-204ENST00000445623 MT1MQ8N339 61 aa4.59□□□□□ -1.67
TIMP1-204ENST00000445623 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
TIMP1-204ENST00000445623 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
TIMP1-204ENST00000445623 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
TIMP1-204ENST00000445623 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
TIMP1-204ENST00000445623 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
TIMP1-204ENST00000445623 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
TIMP1-204ENST00000445623 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
TIMP1-204ENST00000445623 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
TIMP1-204ENST00000445623 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
TIMP1-204ENST00000445623 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
TIMP1-204ENST00000445623 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TIMP1-204ENST00000445623 SVIPQ8NHG7 77 aa4.34□□□□□ -1.71
TIMP1-204ENST00000445623 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
TIMP1-204ENST00000445623 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
TIMP1-204ENST00000445623 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
TIMP1-204ENST00000445623 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
TIMP1-204ENST00000445623 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
TIMP1-204ENST00000445623 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
TIMP1-204ENST00000445623 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
TIMP1-204ENST00000445623 MT4P47944 62 aa4.06□□□□□ -1.76
TIMP1-204ENST00000445623 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TIMP1-204ENST00000445623 MT1AP04731 61 aa4.02□□□□□ -1.77
TIMP1-204ENST00000445623 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
TIMP1-204ENST00000445623 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.78
TIMP1-204ENST00000445623 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
TIMP1-204ENST00000445623 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
TIMP1-204ENST00000445623 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
TIMP1-204ENST00000445623 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
TIMP1-204ENST00000445623 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
TIMP1-204ENST00000445623 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
TIMP1-204ENST00000445623 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
TIMP1-204ENST00000445623 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
TIMP1-204ENST00000445623 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
TIMP1-204ENST00000445623 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
TIMP1-204ENST00000445623 MT3P25713 68 aa3.68□□□□□ -1.82
TIMP1-204ENST00000445623 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
TIMP1-204ENST00000445623 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
TIMP1-204ENST00000445623 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TIMP1-204ENST00000445623 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
TIMP1-204ENST00000445623 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
TIMP1-204ENST00000445623 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
TIMP1-204ENST00000445623 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
TIMP1-204ENST00000445623 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
TIMP1-204ENST00000445623 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TIMP1-204ENST00000445623 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
TIMP1-204ENST00000445623 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
TIMP1-204ENST00000445623 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
TIMP1-204ENST00000445623 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
TIMP1-204ENST00000445623 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
TIMP1-204ENST00000445623 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
TIMP1-204ENST00000445623 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
TIMP1-204ENST00000445623 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
TIMP1-204ENST00000445623 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
TIMP1-204ENST00000445623 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
TIMP1-204ENST00000445623 INE1O15225 51 aa2.89□□□□□ -1.95
TIMP1-204ENST00000445623 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TIMP1-204ENST00000445623 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
TIMP1-204ENST00000445623 PRM1P04553 51 aa2.6□□□□□ -1.99
TIMP1-204ENST00000445623 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
TIMP1-204ENST00000445623 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
TIMP1-204ENST00000445623 LCE1FQ5T754 118 aa2.57□□□□□ -2
TIMP1-204ENST00000445623 H3BS24 57 aa2.4□□□□□ -2.03
TIMP1-204ENST00000445623 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
TIMP1-204ENST00000445623 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
TIMP1-204ENST00000445623 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
TIMP1-204ENST00000445623 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
TIMP1-204ENST00000445623 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms