RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
CLDN9-201ENST00000445369 INE1O15225 51 aa6.11□□□□□ -1.43
CLDN9-201ENST00000445369 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
CLDN9-201ENST00000445369 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
CLDN9-201ENST00000445369 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
CLDN9-201ENST00000445369 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
CLDN9-201ENST00000445369 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
CLDN9-201ENST00000445369 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
CLDN9-201ENST00000445369 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
CLDN9-201ENST00000445369 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
CLDN9-201ENST00000445369 MT1MQ8N339 61 aa5.86□□□□□ -1.47
CLDN9-201ENST00000445369 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CLDN9-201ENST00000445369 MT1GP13640 62 aa5.86□□□□□ -1.47
CLDN9-201ENST00000445369 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
CLDN9-201ENST00000445369 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
CLDN9-201ENST00000445369 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
CLDN9-201ENST00000445369 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
CLDN9-201ENST00000445369 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
CLDN9-201ENST00000445369 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
CLDN9-201ENST00000445369 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
CLDN9-201ENST00000445369 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
CLDN9-201ENST00000445369 NEBP20929 6669 aa5.43□□□□□ -1.54
CLDN9-201ENST00000445369 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
CLDN9-201ENST00000445369 SPRR2EP22531 72 aa5.41□□□□□ -1.54
CLDN9-201ENST00000445369 SPRR2BP35325 72 aa5.41□□□□□ -1.54
CLDN9-201ENST00000445369 SPRR2AP35326 72 aa5.41□□□□□ -1.54
CLDN9-201ENST00000445369 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
CLDN9-201ENST00000445369 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
CLDN9-201ENST00000445369 MT1AP04731 61 aa5.27□□□□□ -1.57
CLDN9-201ENST00000445369 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
CLDN9-201ENST00000445369 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
CLDN9-201ENST00000445369 SPRR2DP22532 72 aa5.19□□□□□ -1.58
CLDN9-201ENST00000445369 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
CLDN9-201ENST00000445369 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
CLDN9-201ENST00000445369 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
CLDN9-201ENST00000445369 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
CLDN9-201ENST00000445369 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
CLDN9-201ENST00000445369 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
CLDN9-201ENST00000445369 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
CLDN9-201ENST00000445369 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CLDN9-201ENST00000445369 MT3P25713 68 aa4.72□□□□□ -1.65
CLDN9-201ENST00000445369 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
CLDN9-201ENST00000445369 PRM1P04553 51 aa4.58□□□□□ -1.68
CLDN9-201ENST00000445369 MT4P47944 62 aa4.55□□□□□ -1.68
CLDN9-201ENST00000445369 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
CLDN9-201ENST00000445369 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
CLDN9-201ENST00000445369 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
CLDN9-201ENST00000445369 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
CLDN9-201ENST00000445369 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
CLDN9-201ENST00000445369 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
CLDN9-201ENST00000445369 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
CLDN9-201ENST00000445369 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
CLDN9-201ENST00000445369 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
CLDN9-201ENST00000445369 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CLDN9-201ENST00000445369 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CLDN9-201ENST00000445369 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
CLDN9-201ENST00000445369 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
CLDN9-201ENST00000445369 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
CLDN9-201ENST00000445369 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
CLDN9-201ENST00000445369 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
CLDN9-201ENST00000445369 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
CLDN9-201ENST00000445369 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
CLDN9-201ENST00000445369 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CLDN9-201ENST00000445369 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
CLDN9-201ENST00000445369 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CLDN9-201ENST00000445369 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CLDN9-201ENST00000445369 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
CLDN9-201ENST00000445369 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CLDN9-201ENST00000445369 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
CLDN9-201ENST00000445369 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CLDN9-201ENST00000445369 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CLDN9-201ENST00000445369 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
CLDN9-201ENST00000445369 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CLDN9-201ENST00000445369 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CLDN9-201ENST00000445369 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CLDN9-201ENST00000445369 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
CLDN9-201ENST00000445369 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 79.5 ms