RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 MT1EP04732 61 aa6.5□□□□□ -1.37
PMPCB-204ENST00000444457 MT1LQ93083 61 aa6.49□□□□□ -1.37
PMPCB-204ENST00000444457 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
PMPCB-204ENST00000444457 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
PMPCB-204ENST00000444457 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
PMPCB-204ENST00000444457 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
PMPCB-204ENST00000444457 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
PMPCB-204ENST00000444457 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
PMPCB-204ENST00000444457 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
PMPCB-204ENST00000444457 KRTAP19-3Q7Z4W3 81 aa6.1□□□□□ -1.43
PMPCB-204ENST00000444457 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
PMPCB-204ENST00000444457 MT1MQ8N339 61 aa6.08□□□□□ -1.44
PMPCB-204ENST00000444457 MT1GP13640 62 aa6.07□□□□□ -1.44
PMPCB-204ENST00000444457 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
PMPCB-204ENST00000444457 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
PMPCB-204ENST00000444457 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
PMPCB-204ENST00000444457 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
PMPCB-204ENST00000444457 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
PMPCB-204ENST00000444457 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
PMPCB-204ENST00000444457 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
PMPCB-204ENST00000444457 KRTAP6-3Q3LI67 103 aa5.74□□□□□ -1.49
PMPCB-204ENST00000444457 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
PMPCB-204ENST00000444457 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
PMPCB-204ENST00000444457 LCE1AQ5T7P2 110 aa5.69□□□□□ -1.5
PMPCB-204ENST00000444457 SPRR2EP22531 72 aa5.67□□□□□ -1.5
PMPCB-204ENST00000444457 SPRR2BP35325 72 aa5.67□□□□□ -1.5
PMPCB-204ENST00000444457 SPRR2AP35326 72 aa5.67□□□□□ -1.5
PMPCB-204ENST00000444457 MT1AP04731 61 aa5.56□□□□□ -1.52
PMPCB-204ENST00000444457 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
PMPCB-204ENST00000444457 KRTAP4-9Q9BYQ8 210 aa5.53□□□□□ -1.52
PMPCB-204ENST00000444457 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
PMPCB-204ENST00000444457 SPRR2DP22532 72 aa5.45□□□□□ -1.54
PMPCB-204ENST00000444457 NEBP20929 6669 aa5.44□□□□□ -1.54
PMPCB-204ENST00000444457 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
PMPCB-204ENST00000444457 PRM1P04553 51 aa5.41□□□□□ -1.54
PMPCB-204ENST00000444457 LCE3DQ9BYE3 92 aa5.41□□□□□ -1.54
PMPCB-204ENST00000444457 LCE3EQ5T5B0 92 aa5.4□□□□□ -1.55
PMPCB-204ENST00000444457 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
PMPCB-204ENST00000444457 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
PMPCB-204ENST00000444457 KRTAP6-2Q3LI66 62 aa5.09□□□□□ -1.59
PMPCB-204ENST00000444457 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
PMPCB-204ENST00000444457 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
PMPCB-204ENST00000444457 MT3P25713 68 aa4.9□□□□□ -1.62
PMPCB-204ENST00000444457 MT4P47944 62 aa4.84□□□□□ -1.64
PMPCB-204ENST00000444457 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
PMPCB-204ENST00000444457 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
PMPCB-204ENST00000444457 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
PMPCB-204ENST00000444457 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
PMPCB-204ENST00000444457 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
PMPCB-204ENST00000444457 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
PMPCB-204ENST00000444457 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
PMPCB-204ENST00000444457 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
PMPCB-204ENST00000444457 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
PMPCB-204ENST00000444457 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
PMPCB-204ENST00000444457 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
PMPCB-204ENST00000444457 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.76
PMPCB-204ENST00000444457 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PMPCB-204ENST00000444457 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
PMPCB-204ENST00000444457 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
PMPCB-204ENST00000444457 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
PMPCB-204ENST00000444457 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
PMPCB-204ENST00000444457 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
PMPCB-204ENST00000444457 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
PMPCB-204ENST00000444457 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
PMPCB-204ENST00000444457 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
PMPCB-204ENST00000444457 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
PMPCB-204ENST00000444457 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PMPCB-204ENST00000444457 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
PMPCB-204ENST00000444457 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
PMPCB-204ENST00000444457 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
PMPCB-204ENST00000444457 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
PMPCB-204ENST00000444457 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
PMPCB-204ENST00000444457 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
PMPCB-204ENST00000444457 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
PMPCB-204ENST00000444457 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
PMPCB-204ENST00000444457 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
PMPCB-204ENST00000444457 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
PMPCB-204ENST00000444457 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 93.6 ms