RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
NLE1-202ENST00000442241 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
NLE1-202ENST00000442241 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
NLE1-202ENST00000442241 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
NLE1-202ENST00000442241 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
NLE1-202ENST00000442241 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
NLE1-202ENST00000442241 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
NLE1-202ENST00000442241 MT1GP13640 62 aa5.33□□□□□ -1.56
NLE1-202ENST00000442241 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
NLE1-202ENST00000442241 MT1MQ8N339 61 aa5.25□□□□□ -1.57
NLE1-202ENST00000442241 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
NLE1-202ENST00000442241 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
NLE1-202ENST00000442241 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
NLE1-202ENST00000442241 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
NLE1-202ENST00000442241 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
NLE1-202ENST00000442241 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
NLE1-202ENST00000442241 KRTAP9-2Q9BYQ4 174 aa5□□□□□ -1.61
NLE1-202ENST00000442241 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
NLE1-202ENST00000442241 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
NLE1-202ENST00000442241 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
NLE1-202ENST00000442241 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
NLE1-202ENST00000442241 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
NLE1-202ENST00000442241 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
NLE1-202ENST00000442241 SPRR2EP22531 72 aa4.76□□□□□ -1.65
NLE1-202ENST00000442241 SPRR2BP35325 72 aa4.76□□□□□ -1.65
NLE1-202ENST00000442241 SPRR2AP35326 72 aa4.76□□□□□ -1.65
NLE1-202ENST00000442241 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
NLE1-202ENST00000442241 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
NLE1-202ENST00000442241 MT1AP04731 61 aa4.63□□□□□ -1.67
NLE1-202ENST00000442241 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.68
NLE1-202ENST00000442241 SPRR2DP22532 72 aa4.54□□□□□ -1.68
NLE1-202ENST00000442241 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
NLE1-202ENST00000442241 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
NLE1-202ENST00000442241 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
NLE1-202ENST00000442241 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
NLE1-202ENST00000442241 KRTAP9-4Q9BYQ2 154 aa4.39□□□□□ -1.71
NLE1-202ENST00000442241 PRM1P04553 51 aa4.39□□□□□ -1.71
NLE1-202ENST00000442241 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
NLE1-202ENST00000442241 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.72
NLE1-202ENST00000442241 NEBP20929 6669 aa4.2□□□□□ -1.74
NLE1-202ENST00000442241 MT3P25713 68 aa4.16□□□□□ -1.74
NLE1-202ENST00000442241 MT4P47944 62 aa4.11□□□□□ -1.75
NLE1-202ENST00000442241 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
NLE1-202ENST00000442241 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
NLE1-202ENST00000442241 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
NLE1-202ENST00000442241 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
NLE1-202ENST00000442241 HMCN1Q96RW7 5635 aa3.94□□□□□ -1.78
NLE1-202ENST00000442241 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
NLE1-202ENST00000442241 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
NLE1-202ENST00000442241 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
NLE1-202ENST00000442241 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
NLE1-202ENST00000442241 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
NLE1-202ENST00000442241 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
NLE1-202ENST00000442241 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
NLE1-202ENST00000442241 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
NLE1-202ENST00000442241 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
NLE1-202ENST00000442241 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
NLE1-202ENST00000442241 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
NLE1-202ENST00000442241 KRTAP4-11Q9BYQ6 195 aa3.27□□□□□ -1.89
NLE1-202ENST00000442241 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NLE1-202ENST00000442241 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
NLE1-202ENST00000442241 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
NLE1-202ENST00000442241 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
NLE1-202ENST00000442241 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
NLE1-202ENST00000442241 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
NLE1-202ENST00000442241 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
NLE1-202ENST00000442241 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
NLE1-202ENST00000442241 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
NLE1-202ENST00000442241 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
NLE1-202ENST00000442241 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
NLE1-202ENST00000442241 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
NLE1-202ENST00000442241 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.96
NLE1-202ENST00000442241 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
NLE1-202ENST00000442241 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
NLE1-202ENST00000442241 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
NLE1-202ENST00000442241 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
NLE1-202ENST00000442241 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms