RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
SHOX2-203ENST00000441443 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
SHOX2-203ENST00000441443 LCE2DQ5TA82 110 aaPredicted RBP6.63□□□□□ -1.35
SHOX2-203ENST00000441443 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
SHOX2-203ENST00000441443 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
SHOX2-203ENST00000441443 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
SHOX2-203ENST00000441443 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
SHOX2-203ENST00000441443 MT1GP13640 62 aa6.5□□□□□ -1.37
SHOX2-203ENST00000441443 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
SHOX2-203ENST00000441443 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
SHOX2-203ENST00000441443 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
SHOX2-203ENST00000441443 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
SHOX2-203ENST00000441443 MT1MQ8N339 61 aa6.33□□□□□ -1.4
SHOX2-203ENST00000441443 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
SHOX2-203ENST00000441443 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
SHOX2-203ENST00000441443 MDN1Q9NU22 5596 aa6.2□□□□□ -1.42
SHOX2-203ENST00000441443 SYNE1Q8NF91 8797 aaKnown RBP6.18□□□□□ -1.42
SHOX2-203ENST00000441443 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
SHOX2-203ENST00000441443 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
SHOX2-203ENST00000441443 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
SHOX2-203ENST00000441443 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
SHOX2-203ENST00000441443 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
SHOX2-203ENST00000441443 MT1AP04731 61 aa5.85□□□□□ -1.47
SHOX2-203ENST00000441443 LCE3DQ9BYE3 92 aa5.85□□□□□ -1.47
SHOX2-203ENST00000441443 PRM1P04553 51 aa5.84□□□□□ -1.47
SHOX2-203ENST00000441443 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
SHOX2-203ENST00000441443 LCE1AQ5T7P2 110 aa5.83□□□□□ -1.48
SHOX2-203ENST00000441443 SPRR2EP22531 72 aa5.81□□□□□ -1.48
SHOX2-203ENST00000441443 SPRR2BP35325 72 aa5.81□□□□□ -1.48
SHOX2-203ENST00000441443 SPRR2AP35326 72 aa5.81□□□□□ -1.48
SHOX2-203ENST00000441443 KRTAP5-5Q701N2 237 aaPredicted RBP5.8□□□□□ -1.48
SHOX2-203ENST00000441443 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
SHOX2-203ENST00000441443 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
SHOX2-203ENST00000441443 SPRR2DP22532 72 aa5.55□□□□□ -1.52
SHOX2-203ENST00000441443 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
SHOX2-203ENST00000441443 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
SHOX2-203ENST00000441443 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
SHOX2-203ENST00000441443 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
SHOX2-203ENST00000441443 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
SHOX2-203ENST00000441443 KRTAP2-2Q9BYT5 123 aa5.18□□□□□ -1.58
SHOX2-203ENST00000441443 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
SHOX2-203ENST00000441443 NEBP20929 6669 aa5.09□□□□□ -1.59
SHOX2-203ENST00000441443 MT3P25713 68 aa5.08□□□□□ -1.6
SHOX2-203ENST00000441443 MT4P47944 62 aa5.02□□□□□ -1.61
SHOX2-203ENST00000441443 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
SHOX2-203ENST00000441443 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
SHOX2-203ENST00000441443 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
SHOX2-203ENST00000441443 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
SHOX2-203ENST00000441443 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
SHOX2-203ENST00000441443 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
SHOX2-203ENST00000441443 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
SHOX2-203ENST00000441443 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
SHOX2-203ENST00000441443 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
SHOX2-203ENST00000441443 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
SHOX2-203ENST00000441443 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
SHOX2-203ENST00000441443 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.7
SHOX2-203ENST00000441443 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
SHOX2-203ENST00000441443 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
SHOX2-203ENST00000441443 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
SHOX2-203ENST00000441443 KRTAP5-10Q6L8G5 202 aa4.2□□□□□ -1.74
SHOX2-203ENST00000441443 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
SHOX2-203ENST00000441443 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
SHOX2-203ENST00000441443 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SHOX2-203ENST00000441443 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SHOX2-203ENST00000441443 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
SHOX2-203ENST00000441443 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SHOX2-203ENST00000441443 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
SHOX2-203ENST00000441443 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
SHOX2-203ENST00000441443 KRTAP21-1Q3LI58 79 aa3.63□□□□□ -1.83
SHOX2-203ENST00000441443 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
SHOX2-203ENST00000441443 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
SHOX2-203ENST00000441443 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
SHOX2-203ENST00000441443 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
SHOX2-203ENST00000441443 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SHOX2-203ENST00000441443 PHGR1C9JFL3 82 aa2.9□□□□□ -1.94
SHOX2-203ENST00000441443 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
SHOX2-203ENST00000441443 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 118.7 ms