RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
ACTN4-204ENST00000440400 MT1EP04732 61 aa4.75□□□□□ -1.65
ACTN4-204ENST00000440400 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
ACTN4-204ENST00000440400 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
ACTN4-204ENST00000440400 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
ACTN4-204ENST00000440400 MT1LQ93083 61 aa4.67□□□□□ -1.66
ACTN4-204ENST00000440400 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
ACTN4-204ENST00000440400 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
ACTN4-204ENST00000440400 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
ACTN4-204ENST00000440400 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
ACTN4-204ENST00000440400 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
ACTN4-204ENST00000440400 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
ACTN4-204ENST00000440400 MT1GP13640 62 aa4.47□□□□□ -1.69
ACTN4-204ENST00000440400 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
ACTN4-204ENST00000440400 MT1MQ8N339 61 aa4.44□□□□□ -1.7
ACTN4-204ENST00000440400 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
ACTN4-204ENST00000440400 KRTAP9-6A0A140TA67 174 aa4.39□□□□□ -1.71
ACTN4-204ENST00000440400 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
ACTN4-204ENST00000440400 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
ACTN4-204ENST00000440400 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
ACTN4-204ENST00000440400 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
ACTN4-204ENST00000440400 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
ACTN4-204ENST00000440400 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
ACTN4-204ENST00000440400 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
ACTN4-204ENST00000440400 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
ACTN4-204ENST00000440400 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
ACTN4-204ENST00000440400 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
ACTN4-204ENST00000440400 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
ACTN4-204ENST00000440400 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
ACTN4-204ENST00000440400 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
ACTN4-204ENST00000440400 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
ACTN4-204ENST00000440400 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
ACTN4-204ENST00000440400 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
ACTN4-204ENST00000440400 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
ACTN4-204ENST00000440400 SPRR2EP22531 72 aa4.14□□□□□ -1.75
ACTN4-204ENST00000440400 SPRR2BP35325 72 aa4.14□□□□□ -1.75
ACTN4-204ENST00000440400 SPRR2AP35326 72 aa4.14□□□□□ -1.75
ACTN4-204ENST00000440400 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
ACTN4-204ENST00000440400 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
ACTN4-204ENST00000440400 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
ACTN4-204ENST00000440400 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
ACTN4-204ENST00000440400 SPRR2DP22532 72 aa3.99□□□□□ -1.77
ACTN4-204ENST00000440400 MT1AP04731 61 aa3.98□□□□□ -1.77
ACTN4-204ENST00000440400 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
ACTN4-204ENST00000440400 NEBP20929 6669 aa3.88□□□□□ -1.79
ACTN4-204ENST00000440400 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
ACTN4-204ENST00000440400 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
ACTN4-204ENST00000440400 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
ACTN4-204ENST00000440400 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
ACTN4-204ENST00000440400 PRM1P04553 51 aa3.76□□□□□ -1.81
ACTN4-204ENST00000440400 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
ACTN4-204ENST00000440400 MT4P47944 62 aa3.63□□□□□ -1.83
ACTN4-204ENST00000440400 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.83
ACTN4-204ENST00000440400 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.84
ACTN4-204ENST00000440400 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
ACTN4-204ENST00000440400 MT3P25713 68 aa3.55□□□□□ -1.84
ACTN4-204ENST00000440400 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
ACTN4-204ENST00000440400 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
ACTN4-204ENST00000440400 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
ACTN4-204ENST00000440400 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
ACTN4-204ENST00000440400 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
ACTN4-204ENST00000440400 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
ACTN4-204ENST00000440400 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
ACTN4-204ENST00000440400 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
ACTN4-204ENST00000440400 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
ACTN4-204ENST00000440400 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
ACTN4-204ENST00000440400 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
ACTN4-204ENST00000440400 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
ACTN4-204ENST00000440400 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
ACTN4-204ENST00000440400 KRTAP5-8O75690 187 aa2.9□□□□□ -1.94
ACTN4-204ENST00000440400 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
ACTN4-204ENST00000440400 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
ACTN4-204ENST00000440400 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
ACTN4-204ENST00000440400 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
ACTN4-204ENST00000440400 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
ACTN4-204ENST00000440400 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ACTN4-204ENST00000440400 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
ACTN4-204ENST00000440400 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 85.6 ms