RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 MACF1Q9UPN3 7388 aaKnown RBP2.75□□□□□ -1.97
APP-209ENST00000440126 MT1LQ93083 61 aa2.75□□□□□ -1.97
APP-209ENST00000440126 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
APP-209ENST00000440126 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
APP-209ENST00000440126 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
APP-209ENST00000440126 KRTAP9-6A0A140TA67 174 aa2.69□□□□□ -1.98
APP-209ENST00000440126 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
APP-209ENST00000440126 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
APP-209ENST00000440126 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
APP-209ENST00000440126 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
APP-209ENST00000440126 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
APP-209ENST00000440126 MT1GP13640 62 aa2.64□□□□□ -1.99
APP-209ENST00000440126 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
APP-209ENST00000440126 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
APP-209ENST00000440126 MT1MQ8N339 61 aa2.6□□□□□ -1.99
APP-209ENST00000440126 LCE1AQ5T7P2 110 aa2.59□□□□□ -2
APP-209ENST00000440126 KRTAP19-4Q3LI73 84 aa2.58□□□□□ -2
APP-209ENST00000440126 SYNE1Q8NF91 8797 aaKnown RBP2.58□□□□□ -2
APP-209ENST00000440126 LCE1EQ5T753 118 aa2.56□□□□□ -2
APP-209ENST00000440126 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
APP-209ENST00000440126 KRTAP12-4P60329 112 aa2.53□□□□□ -2
APP-209ENST00000440126 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
APP-209ENST00000440126 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
APP-209ENST00000440126 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
APP-209ENST00000440126 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
APP-209ENST00000440126 SPRR2EP22531 72 aa2.45□□□□□ -2.02
APP-209ENST00000440126 SPRR2BP35325 72 aa2.45□□□□□ -2.02
APP-209ENST00000440126 SPRR2AP35326 72 aa2.45□□□□□ -2.02
APP-209ENST00000440126 LCE3BQ5TA77 95 aa2.43□□□□□ -2.02
APP-209ENST00000440126 LCE1DQ5T752 114 aa2.41□□□□□ -2.02
APP-209ENST00000440126 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
APP-209ENST00000440126 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.41□□□□□ -2.02
APP-209ENST00000440126 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
APP-209ENST00000440126 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
APP-209ENST00000440126 KRTAP9-7A8MTY7 169 aa2.37□□□□□ -2.03
APP-209ENST00000440126 SPRR2DP22532 72 aa2.33□□□□□ -2.04
APP-209ENST00000440126 PRM1P04553 51 aa2.33□□□□□ -2.04
APP-209ENST00000440126 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
APP-209ENST00000440126 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
APP-209ENST00000440126 MT1AP04731 61 aa2.27□□□□□ -2.05
APP-209ENST00000440126 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
APP-209ENST00000440126 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
APP-209ENST00000440126 NEBP20929 6669 aa2.2□□□□□ -2.06
APP-209ENST00000440126 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
APP-209ENST00000440126 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
APP-209ENST00000440126 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
APP-209ENST00000440126 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
APP-209ENST00000440126 MT4P47944 62 aa2.14□□□□□ -2.07
APP-209ENST00000440126 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
APP-209ENST00000440126 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
APP-209ENST00000440126 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
APP-209ENST00000440126 MT3P25713 68 aa2.05□□□□□ -2.08
APP-209ENST00000440126 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
APP-209ENST00000440126 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.09
APP-209ENST00000440126 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
APP-209ENST00000440126 KRTAP20-2Q3LI61 65 aa1.98□□□□□ -2.09
APP-209ENST00000440126 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
APP-209ENST00000440126 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
APP-209ENST00000440126 KRTAP4-2Q9BYR5 136 aa1.83□□□□□ -2.12
APP-209ENST00000440126 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
APP-209ENST00000440126 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
APP-209ENST00000440126 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
APP-209ENST00000440126 KRTAP4-12Q9BQ66 201 aa1.69□□□□□ -2.14
APP-209ENST00000440126 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
APP-209ENST00000440126 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
APP-209ENST00000440126 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.14
APP-209ENST00000440126 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
APP-209ENST00000440126 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
APP-209ENST00000440126 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
APP-209ENST00000440126 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
APP-209ENST00000440126 KRTAP4-4Q9BYR3 166 aa1.53□□□□□ -2.17
APP-209ENST00000440126 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
APP-209ENST00000440126 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
APP-209ENST00000440126 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
APP-209ENST00000440126 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
APP-209ENST00000440126 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
APP-209ENST00000440126 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms