RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
CPNE1-218ENST00000439806 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
CPNE1-218ENST00000439806 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
CPNE1-218ENST00000439806 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
CPNE1-218ENST00000439806 MT1GP13640 62 aa3.48□□□□□ -1.85
CPNE1-218ENST00000439806 MT1MQ8N339 61 aa3.47□□□□□ -1.85
CPNE1-218ENST00000439806 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
CPNE1-218ENST00000439806 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
CPNE1-218ENST00000439806 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
CPNE1-218ENST00000439806 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CPNE1-218ENST00000439806 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
CPNE1-218ENST00000439806 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
CPNE1-218ENST00000439806 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
CPNE1-218ENST00000439806 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
CPNE1-218ENST00000439806 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
CPNE1-218ENST00000439806 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
CPNE1-218ENST00000439806 KRTAP9-4Q9BYQ2 154 aa3.34□□□□□ -1.87
CPNE1-218ENST00000439806 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
CPNE1-218ENST00000439806 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
CPNE1-218ENST00000439806 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
CPNE1-218ENST00000439806 SPRR2EP22531 72 aa3.21□□□□□ -1.9
CPNE1-218ENST00000439806 SPRR2BP35325 72 aa3.21□□□□□ -1.9
CPNE1-218ENST00000439806 SPRR2AP35326 72 aa3.21□□□□□ -1.9
CPNE1-218ENST00000439806 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
CPNE1-218ENST00000439806 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
CPNE1-218ENST00000439806 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
CPNE1-218ENST00000439806 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
CPNE1-218ENST00000439806 MT1AP04731 61 aa3.13□□□□□ -1.91
CPNE1-218ENST00000439806 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
CPNE1-218ENST00000439806 SPRR2DP22532 72 aa3.08□□□□□ -1.92
CPNE1-218ENST00000439806 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
CPNE1-218ENST00000439806 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
CPNE1-218ENST00000439806 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
CPNE1-218ENST00000439806 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
CPNE1-218ENST00000439806 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
CPNE1-218ENST00000439806 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
CPNE1-218ENST00000439806 KRTAP12-4P60329 112 aa3□□□□□ -1.93
CPNE1-218ENST00000439806 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
CPNE1-218ENST00000439806 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.94
CPNE1-218ENST00000439806 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
CPNE1-218ENST00000439806 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
CPNE1-218ENST00000439806 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CPNE1-218ENST00000439806 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
CPNE1-218ENST00000439806 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
CPNE1-218ENST00000439806 MT3P25713 68 aa2.81□□□□□ -1.96
CPNE1-218ENST00000439806 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CPNE1-218ENST00000439806 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
CPNE1-218ENST00000439806 MT4P47944 62 aa2.67□□□□□ -1.98
CPNE1-218ENST00000439806 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
CPNE1-218ENST00000439806 PRM1P04553 51 aa2.65□□□□□ -1.99
CPNE1-218ENST00000439806 NEBP20929 6669 aa2.64□□□□□ -1.99
CPNE1-218ENST00000439806 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
CPNE1-218ENST00000439806 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
CPNE1-218ENST00000439806 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
CPNE1-218ENST00000439806 KRTAP20-1Q3LI63 56 aa2.54□□□□□ -2
CPNE1-218ENST00000439806 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
CPNE1-218ENST00000439806 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
CPNE1-218ENST00000439806 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
CPNE1-218ENST00000439806 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
CPNE1-218ENST00000439806 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CPNE1-218ENST00000439806 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
CPNE1-218ENST00000439806 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CPNE1-218ENST00000439806 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
CPNE1-218ENST00000439806 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CPNE1-218ENST00000439806 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
CPNE1-218ENST00000439806 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
CPNE1-218ENST00000439806 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
CPNE1-218ENST00000439806 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
CPNE1-218ENST00000439806 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CPNE1-218ENST00000439806 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
CPNE1-218ENST00000439806 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
CPNE1-218ENST00000439806 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
CPNE1-218ENST00000439806 LCE1FQ5T754 118 aa1.73□□□□□ -2.13
CPNE1-218ENST00000439806 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
CPNE1-218ENST00000439806 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
CPNE1-218ENST00000439806 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
CPNE1-218ENST00000439806 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
CPNE1-218ENST00000439806 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 18.3 ms