RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
HDAC8-214ENST00000439122 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
HDAC8-214ENST00000439122 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
HDAC8-214ENST00000439122 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
HDAC8-214ENST00000439122 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
HDAC8-214ENST00000439122 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
HDAC8-214ENST00000439122 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
HDAC8-214ENST00000439122 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
HDAC8-214ENST00000439122 MT1EP04732 61 aa4.24□□□□□ -1.73
HDAC8-214ENST00000439122 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
HDAC8-214ENST00000439122 MT1LQ93083 61 aa4.22□□□□□ -1.73
HDAC8-214ENST00000439122 INE1O15225 51 aa4.2□□□□□ -1.74
HDAC8-214ENST00000439122 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
HDAC8-214ENST00000439122 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
HDAC8-214ENST00000439122 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
HDAC8-214ENST00000439122 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
HDAC8-214ENST00000439122 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
HDAC8-214ENST00000439122 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
HDAC8-214ENST00000439122 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
HDAC8-214ENST00000439122 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
HDAC8-214ENST00000439122 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
HDAC8-214ENST00000439122 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
HDAC8-214ENST00000439122 MT1GP13640 62 aa3.97□□□□□ -1.77
HDAC8-214ENST00000439122 MT1MQ8N339 61 aa3.97□□□□□ -1.77
HDAC8-214ENST00000439122 MACF1Q9UPN3 7388 aaKnown RBP3.93□□□□□ -1.78
HDAC8-214ENST00000439122 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
HDAC8-214ENST00000439122 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
HDAC8-214ENST00000439122 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
HDAC8-214ENST00000439122 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
HDAC8-214ENST00000439122 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
HDAC8-214ENST00000439122 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
HDAC8-214ENST00000439122 NEBP20929 6669 aa3.71□□□□□ -1.82
HDAC8-214ENST00000439122 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
HDAC8-214ENST00000439122 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
HDAC8-214ENST00000439122 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
HDAC8-214ENST00000439122 KRTAP20-1Q3LI63 56 aa3.64□□□□□ -1.83
HDAC8-214ENST00000439122 SPRR2EP22531 72 aa3.59□□□□□ -1.83
HDAC8-214ENST00000439122 SPRR2BP35325 72 aa3.59□□□□□ -1.83
HDAC8-214ENST00000439122 SPRR2AP35326 72 aa3.59□□□□□ -1.83
HDAC8-214ENST00000439122 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
HDAC8-214ENST00000439122 KRTAP12-4P60329 112 aa3.59□□□□□ -1.84
HDAC8-214ENST00000439122 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
HDAC8-214ENST00000439122 MT1AP04731 61 aa3.55□□□□□ -1.84
HDAC8-214ENST00000439122 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
HDAC8-214ENST00000439122 SPRR2DP22532 72 aa3.44□□□□□ -1.86
HDAC8-214ENST00000439122 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
HDAC8-214ENST00000439122 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
HDAC8-214ENST00000439122 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
HDAC8-214ENST00000439122 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
HDAC8-214ENST00000439122 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
HDAC8-214ENST00000439122 MT3P25713 68 aa3.21□□□□□ -1.9
HDAC8-214ENST00000439122 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
HDAC8-214ENST00000439122 PRM1P04553 51 aa3.15□□□□□ -1.9
HDAC8-214ENST00000439122 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
HDAC8-214ENST00000439122 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
HDAC8-214ENST00000439122 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
HDAC8-214ENST00000439122 MT4P47944 62 aa3.04□□□□□ -1.92
HDAC8-214ENST00000439122 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
HDAC8-214ENST00000439122 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
HDAC8-214ENST00000439122 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
HDAC8-214ENST00000439122 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
HDAC8-214ENST00000439122 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
HDAC8-214ENST00000439122 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
HDAC8-214ENST00000439122 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
HDAC8-214ENST00000439122 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
HDAC8-214ENST00000439122 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
HDAC8-214ENST00000439122 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
HDAC8-214ENST00000439122 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
HDAC8-214ENST00000439122 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
HDAC8-214ENST00000439122 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
HDAC8-214ENST00000439122 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
HDAC8-214ENST00000439122 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
HDAC8-214ENST00000439122 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
HDAC8-214ENST00000439122 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
HDAC8-214ENST00000439122 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
HDAC8-214ENST00000439122 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
HDAC8-214ENST00000439122 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 87 ms