RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TNP1P09430 55 aa6.55□□□□□ -1.36
AC004540.1-201ENST00000439120 MT1LQ93083 61 aa6.55□□□□□ -1.36
AC004540.1-201ENST00000439120 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
AC004540.1-201ENST00000439120 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
AC004540.1-201ENST00000439120 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
AC004540.1-201ENST00000439120 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
AC004540.1-201ENST00000439120 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
AC004540.1-201ENST00000439120 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
AC004540.1-201ENST00000439120 MT4P47944 62 aa6.47□□□□□ -1.37
AC004540.1-201ENST00000439120 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
AC004540.1-201ENST00000439120 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
AC004540.1-201ENST00000439120 PSPHP1O15172 72 aa6.37□□□□□ -1.39
AC004540.1-201ENST00000439120 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
AC004540.1-201ENST00000439120 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
AC004540.1-201ENST00000439120 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
AC004540.1-201ENST00000439120 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
AC004540.1-201ENST00000439120 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
AC004540.1-201ENST00000439120 A6NED7 52 aa6.26□□□□□ -1.41
AC004540.1-201ENST00000439120 UQCR11O14957 56 aa6.23□□□□□ -1.41
AC004540.1-201ENST00000439120 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
AC004540.1-201ENST00000439120 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
AC004540.1-201ENST00000439120 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
AC004540.1-201ENST00000439120 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
AC004540.1-201ENST00000439120 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
AC004540.1-201ENST00000439120 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
AC004540.1-201ENST00000439120 K7ERS5 55 aa6.05□□□□□ -1.44
AC004540.1-201ENST00000439120 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
AC004540.1-201ENST00000439120 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
AC004540.1-201ENST00000439120 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
AC004540.1-201ENST00000439120 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
AC004540.1-201ENST00000439120 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
AC004540.1-201ENST00000439120 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
AC004540.1-201ENST00000439120 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
AC004540.1-201ENST00000439120 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
AC004540.1-201ENST00000439120 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
AC004540.1-201ENST00000439120 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
AC004540.1-201ENST00000439120 MT1AP04731 61 aa5.57□□□□□ -1.52
AC004540.1-201ENST00000439120 ROMO1P60602 79 aa5.55□□□□□ -1.52
AC004540.1-201ENST00000439120 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
AC004540.1-201ENST00000439120 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
AC004540.1-201ENST00000439120 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
AC004540.1-201ENST00000439120 H3BS24 57 aa5.45□□□□□ -1.54
AC004540.1-201ENST00000439120 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
AC004540.1-201ENST00000439120 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
AC004540.1-201ENST00000439120 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
AC004540.1-201ENST00000439120 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
AC004540.1-201ENST00000439120 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
AC004540.1-201ENST00000439120 MT3P25713 68 aa5.13□□□□□ -1.59
AC004540.1-201ENST00000439120 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
AC004540.1-201ENST00000439120 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
AC004540.1-201ENST00000439120 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
AC004540.1-201ENST00000439120 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
AC004540.1-201ENST00000439120 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
AC004540.1-201ENST00000439120 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
AC004540.1-201ENST00000439120 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
AC004540.1-201ENST00000439120 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
AC004540.1-201ENST00000439120 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
AC004540.1-201ENST00000439120 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
AC004540.1-201ENST00000439120 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
AC004540.1-201ENST00000439120 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
AC004540.1-201ENST00000439120 INE1O15225 51 aa4.32□□□□□ -1.72
AC004540.1-201ENST00000439120 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
AC004540.1-201ENST00000439120 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
AC004540.1-201ENST00000439120 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
AC004540.1-201ENST00000439120 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
AC004540.1-201ENST00000439120 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
AC004540.1-201ENST00000439120 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
AC004540.1-201ENST00000439120 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
AC004540.1-201ENST00000439120 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
AC004540.1-201ENST00000439120 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
AC004540.1-201ENST00000439120 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
AC004540.1-201ENST00000439120 PRM1P04553 51 aa2.82□□□□□ -1.96
AC004540.1-201ENST00000439120 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
AC004540.1-201ENST00000439120 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 50.3 ms