RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TNP1P09430 55 aa6.55□□□□□ -1.36
AC004540.1-201ENST00000439120 MT1LQ93083 61 aa6.55□□□□□ -1.36
AC004540.1-201ENST00000439120 LCE1DQ5T752 114 aa6.53□□□□□ -1.36
AC004540.1-201ENST00000439120 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
AC004540.1-201ENST00000439120 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
AC004540.1-201ENST00000439120 PMAIP1Q13794 54 aa6.51□□□□□ -1.37
AC004540.1-201ENST00000439120 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
AC004540.1-201ENST00000439120 PRR15LQ9BU68 103 aa6.48□□□□□ -1.37
AC004540.1-201ENST00000439120 MT4P47944 62 aa6.47□□□□□ -1.37
AC004540.1-201ENST00000439120 KRTAP4-3Q9BYR4 195 aa6.4□□□□□ -1.38
AC004540.1-201ENST00000439120 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
AC004540.1-201ENST00000439120 PSPHP1O15172 72 aa6.37□□□□□ -1.39
AC004540.1-201ENST00000439120 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
AC004540.1-201ENST00000439120 KTN1-AS1Q86SY8 53 aa6.33□□□□□ -1.4
AC004540.1-201ENST00000439120 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
AC004540.1-201ENST00000439120 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
AC004540.1-201ENST00000439120 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
AC004540.1-201ENST00000439120 A6NED7 52 aa6.26□□□□□ -1.41
AC004540.1-201ENST00000439120 UQCR11O14957 56 aa6.23□□□□□ -1.41
AC004540.1-201ENST00000439120 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
AC004540.1-201ENST00000439120 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
AC004540.1-201ENST00000439120 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
AC004540.1-201ENST00000439120 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
AC004540.1-201ENST00000439120 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
AC004540.1-201ENST00000439120 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
AC004540.1-201ENST00000439120 K7ERS5 55 aa6.05□□□□□ -1.44
AC004540.1-201ENST00000439120 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
AC004540.1-201ENST00000439120 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
AC004540.1-201ENST00000439120 KRTAP12-4P60329 112 aa5.96□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
AC004540.1-201ENST00000439120 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
AC004540.1-201ENST00000439120 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
AC004540.1-201ENST00000439120 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
AC004540.1-201ENST00000439120 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
AC004540.1-201ENST00000439120 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
AC004540.1-201ENST00000439120 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
AC004540.1-201ENST00000439120 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
AC004540.1-201ENST00000439120 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
AC004540.1-201ENST00000439120 MT1AP04731 61 aa5.57□□□□□ -1.52
AC004540.1-201ENST00000439120 ROMO1P60602 79 aa5.55□□□□□ -1.52
AC004540.1-201ENST00000439120 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
AC004540.1-201ENST00000439120 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
AC004540.1-201ENST00000439120 KRTAP5-2Q701N4 177 aa5.5□□□□□ -1.53
AC004540.1-201ENST00000439120 H3BS24 57 aa5.45□□□□□ -1.54
AC004540.1-201ENST00000439120 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
AC004540.1-201ENST00000439120 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
AC004540.1-201ENST00000439120 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
AC004540.1-201ENST00000439120 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
AC004540.1-201ENST00000439120 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
AC004540.1-201ENST00000439120 MT3P25713 68 aa5.13□□□□□ -1.59
AC004540.1-201ENST00000439120 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
AC004540.1-201ENST00000439120 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
AC004540.1-201ENST00000439120 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
AC004540.1-201ENST00000439120 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
AC004540.1-201ENST00000439120 NDUFAF8A1L188 74 aa4.96□□□□□ -1.62
AC004540.1-201ENST00000439120 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
AC004540.1-201ENST00000439120 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
AC004540.1-201ENST00000439120 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
AC004540.1-201ENST00000439120 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
AC004540.1-201ENST00000439120 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
AC004540.1-201ENST00000439120 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
AC004540.1-201ENST00000439120 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
AC004540.1-201ENST00000439120 INE1O15225 51 aa4.32□□□□□ -1.72
AC004540.1-201ENST00000439120 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
AC004540.1-201ENST00000439120 KRTAP4-12Q9BQ66 201 aa4.12□□□□□ -1.75
AC004540.1-201ENST00000439120 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
AC004540.1-201ENST00000439120 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
AC004540.1-201ENST00000439120 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
AC004540.1-201ENST00000439120 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
AC004540.1-201ENST00000439120 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
AC004540.1-201ENST00000439120 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
AC004540.1-201ENST00000439120 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
AC004540.1-201ENST00000439120 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
AC004540.1-201ENST00000439120 PRM1P04553 51 aa2.82□□□□□ -1.96
AC004540.1-201ENST00000439120 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
AC004540.1-201ENST00000439120 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 47.6 ms