RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 MT1EP04732 61 aa4.87□□□□□ -1.63
TSC2-206ENST00000439117 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
TSC2-206ENST00000439117 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
TSC2-206ENST00000439117 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
TSC2-206ENST00000439117 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
TSC2-206ENST00000439117 HMCN2Q8NDA2 5059 aa4.76□□□□□ -1.65
TSC2-206ENST00000439117 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
TSC2-206ENST00000439117 MT1MQ8N339 61 aa4.7□□□□□ -1.66
TSC2-206ENST00000439117 PRM1P04553 51 aa4.68□□□□□ -1.66
TSC2-206ENST00000439117 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
TSC2-206ENST00000439117 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
TSC2-206ENST00000439117 MUC2Q02817 5179 aa4.56□□□□□ -1.68
TSC2-206ENST00000439117 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
TSC2-206ENST00000439117 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
TSC2-206ENST00000439117 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
TSC2-206ENST00000439117 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
TSC2-206ENST00000439117 MT3P25713 68 aa4.5□□□□□ -1.69
TSC2-206ENST00000439117 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
TSC2-206ENST00000439117 MT4P47944 62 aa4.45□□□□□ -1.7
TSC2-206ENST00000439117 MT1AP04731 61 aa4.33□□□□□ -1.72
TSC2-206ENST00000439117 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
TSC2-206ENST00000439117 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
TSC2-206ENST00000439117 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
TSC2-206ENST00000439117 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
TSC2-206ENST00000439117 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
TSC2-206ENST00000439117 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
TSC2-206ENST00000439117 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
TSC2-206ENST00000439117 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
TSC2-206ENST00000439117 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
TSC2-206ENST00000439117 USH2AO75445 5202 aa4.17□□□□□ -1.74
TSC2-206ENST00000439117 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
TSC2-206ENST00000439117 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
TSC2-206ENST00000439117 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
TSC2-206ENST00000439117 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
TSC2-206ENST00000439117 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
TSC2-206ENST00000439117 FCGBPQ9Y6R7 5405 aaPredicted RBP4.02□□□□□ -1.77
TSC2-206ENST00000439117 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
TSC2-206ENST00000439117 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
TSC2-206ENST00000439117 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
TSC2-206ENST00000439117 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
TSC2-206ENST00000439117 KMT2DO14686 5537 aa3.85□□□□□ -1.79
TSC2-206ENST00000439117 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
TSC2-206ENST00000439117 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
TSC2-206ENST00000439117 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
TSC2-206ENST00000439117 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
TSC2-206ENST00000439117 NEBP20929 6669 aa3.68□□□□□ -1.82
TSC2-206ENST00000439117 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
TSC2-206ENST00000439117 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
TSC2-206ENST00000439117 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
TSC2-206ENST00000439117 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
TSC2-206ENST00000439117 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
TSC2-206ENST00000439117 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
TSC2-206ENST00000439117 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
TSC2-206ENST00000439117 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
TSC2-206ENST00000439117 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
TSC2-206ENST00000439117 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TSC2-206ENST00000439117 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
TSC2-206ENST00000439117 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
TSC2-206ENST00000439117 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TSC2-206ENST00000439117 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
TSC2-206ENST00000439117 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
TSC2-206ENST00000439117 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
TSC2-206ENST00000439117 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
TSC2-206ENST00000439117 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
TSC2-206ENST00000439117 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.97
TSC2-206ENST00000439117 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
TSC2-206ENST00000439117 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
TSC2-206ENST00000439117 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
TSC2-206ENST00000439117 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
TSC2-206ENST00000439117 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
TSC2-206ENST00000439117 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
TSC2-206ENST00000439117 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
TSC2-206ENST00000439117 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
TSC2-206ENST00000439117 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
TSC2-206ENST00000439117 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
TSC2-206ENST00000439117 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
TSC2-206ENST00000439117 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
TSC2-206ENST00000439117 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 278.1 ms