RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
KCNC4-204ENST00000438661 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
KCNC4-204ENST00000438661 MT1GP13640 62 aa5.82□□□□□ -1.48
KCNC4-204ENST00000438661 DSTQ03001 7570 aaKnown RBP5.81□□□□□ -1.48
KCNC4-204ENST00000438661 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
KCNC4-204ENST00000438661 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
KCNC4-204ENST00000438661 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
KCNC4-204ENST00000438661 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
KCNC4-204ENST00000438661 LCE2DQ5TA82 110 aaPredicted RBP5.63□□□□□ -1.51
KCNC4-204ENST00000438661 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
KCNC4-204ENST00000438661 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
KCNC4-204ENST00000438661 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
KCNC4-204ENST00000438661 MT1MQ8N339 61 aa5.55□□□□□ -1.52
KCNC4-204ENST00000438661 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
KCNC4-204ENST00000438661 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
KCNC4-204ENST00000438661 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
KCNC4-204ENST00000438661 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
KCNC4-204ENST00000438661 PRM1P04553 51 aa5.34□□□□□ -1.55
KCNC4-204ENST00000438661 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
KCNC4-204ENST00000438661 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
KCNC4-204ENST00000438661 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
KCNC4-204ENST00000438661 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
KCNC4-204ENST00000438661 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
KCNC4-204ENST00000438661 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
KCNC4-204ENST00000438661 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
KCNC4-204ENST00000438661 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
KCNC4-204ENST00000438661 MT1AP04731 61 aa5.16□□□□□ -1.58
KCNC4-204ENST00000438661 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
KCNC4-204ENST00000438661 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
KCNC4-204ENST00000438661 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
KCNC4-204ENST00000438661 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
KCNC4-204ENST00000438661 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
KCNC4-204ENST00000438661 SPRR2EP22531 72 aa4.75□□□□□ -1.65
KCNC4-204ENST00000438661 SPRR2BP35325 72 aa4.75□□□□□ -1.65
KCNC4-204ENST00000438661 SPRR2AP35326 72 aa4.75□□□□□ -1.65
KCNC4-204ENST00000438661 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
KCNC4-204ENST00000438661 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
KCNC4-204ENST00000438661 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
KCNC4-204ENST00000438661 SPRR2DP22532 72 aa4.53□□□□□ -1.68
KCNC4-204ENST00000438661 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
KCNC4-204ENST00000438661 MT3P25713 68 aa4.47□□□□□ -1.69
KCNC4-204ENST00000438661 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
KCNC4-204ENST00000438661 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
KCNC4-204ENST00000438661 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.74
KCNC4-204ENST00000438661 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
KCNC4-204ENST00000438661 MT4P47944 62 aa4.08□□□□□ -1.76
KCNC4-204ENST00000438661 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
KCNC4-204ENST00000438661 NEBP20929 6669 aa3.97□□□□□ -1.77
KCNC4-204ENST00000438661 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
KCNC4-204ENST00000438661 KRTAP20-2Q3LI61 65 aa3.95□□□□□ -1.78
KCNC4-204ENST00000438661 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
KCNC4-204ENST00000438661 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
KCNC4-204ENST00000438661 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
KCNC4-204ENST00000438661 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
KCNC4-204ENST00000438661 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
KCNC4-204ENST00000438661 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
KCNC4-204ENST00000438661 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
KCNC4-204ENST00000438661 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
KCNC4-204ENST00000438661 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
KCNC4-204ENST00000438661 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
KCNC4-204ENST00000438661 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
KCNC4-204ENST00000438661 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
KCNC4-204ENST00000438661 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
KCNC4-204ENST00000438661 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
KCNC4-204ENST00000438661 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
KCNC4-204ENST00000438661 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
KCNC4-204ENST00000438661 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
KCNC4-204ENST00000438661 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
KCNC4-204ENST00000438661 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
KCNC4-204ENST00000438661 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
KCNC4-204ENST00000438661 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
KCNC4-204ENST00000438661 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
KCNC4-204ENST00000438661 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
KCNC4-204ENST00000438661 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
KCNC4-204ENST00000438661 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
KCNC4-204ENST00000438661 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
KCNC4-204ENST00000438661 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 134.8 ms