RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
EXT1-203ENST00000437196 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
EXT1-203ENST00000437196 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
EXT1-203ENST00000437196 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
EXT1-203ENST00000437196 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
EXT1-203ENST00000437196 PMAIP1Q13794 54 aa5□□□□□ -1.61
EXT1-203ENST00000437196 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
EXT1-203ENST00000437196 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
EXT1-203ENST00000437196 PP632Q6XCG6 107 aa5□□□□□ -1.61
EXT1-203ENST00000437196 SPRR2EP22531 72 aa4.97□□□□□ -1.61
EXT1-203ENST00000437196 SPRR2BP35325 72 aa4.97□□□□□ -1.61
EXT1-203ENST00000437196 SPRR2AP35326 72 aa4.97□□□□□ -1.61
EXT1-203ENST00000437196 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
EXT1-203ENST00000437196 MT1EP04732 61 aa4.97□□□□□ -1.61
EXT1-203ENST00000437196 NEBP20929 6669 aa4.95□□□□□ -1.62
EXT1-203ENST00000437196 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
EXT1-203ENST00000437196 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
EXT1-203ENST00000437196 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
EXT1-203ENST00000437196 MT1GP13640 62 aa4.81□□□□□ -1.64
EXT1-203ENST00000437196 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
EXT1-203ENST00000437196 SPRR2DP22532 72 aa4.8□□□□□ -1.64
EXT1-203ENST00000437196 MT1LQ93083 61 aa4.8□□□□□ -1.64
EXT1-203ENST00000437196 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
EXT1-203ENST00000437196 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
EXT1-203ENST00000437196 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.66
EXT1-203ENST00000437196 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
EXT1-203ENST00000437196 MT1MQ8N339 61 aa4.7□□□□□ -1.66
EXT1-203ENST00000437196 KTN1-AS1Q86SY8 53 aa4.67□□□□□ -1.66
EXT1-203ENST00000437196 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
EXT1-203ENST00000437196 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
EXT1-203ENST00000437196 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
EXT1-203ENST00000437196 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
EXT1-203ENST00000437196 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
EXT1-203ENST00000437196 H3BS24 57 aa4.56□□□□□ -1.68
EXT1-203ENST00000437196 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
EXT1-203ENST00000437196 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
EXT1-203ENST00000437196 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
EXT1-203ENST00000437196 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
EXT1-203ENST00000437196 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
EXT1-203ENST00000437196 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
EXT1-203ENST00000437196 MT4P47944 62 aa4.14□□□□□ -1.75
EXT1-203ENST00000437196 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
EXT1-203ENST00000437196 MT1AP04731 61 aa4.12□□□□□ -1.75
EXT1-203ENST00000437196 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
EXT1-203ENST00000437196 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
EXT1-203ENST00000437196 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
EXT1-203ENST00000437196 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
EXT1-203ENST00000437196 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
EXT1-203ENST00000437196 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
EXT1-203ENST00000437196 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
EXT1-203ENST00000437196 MT3P25713 68 aa3.78□□□□□ -1.8
EXT1-203ENST00000437196 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
EXT1-203ENST00000437196 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
EXT1-203ENST00000437196 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
EXT1-203ENST00000437196 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
EXT1-203ENST00000437196 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
EXT1-203ENST00000437196 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
EXT1-203ENST00000437196 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
EXT1-203ENST00000437196 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
EXT1-203ENST00000437196 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
EXT1-203ENST00000437196 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
EXT1-203ENST00000437196 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
EXT1-203ENST00000437196 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
EXT1-203ENST00000437196 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
EXT1-203ENST00000437196 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
EXT1-203ENST00000437196 INE1O15225 51 aa3.21□□□□□ -1.9
EXT1-203ENST00000437196 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
EXT1-203ENST00000437196 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
EXT1-203ENST00000437196 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
EXT1-203ENST00000437196 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
EXT1-203ENST00000437196 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
EXT1-203ENST00000437196 PRM1P04553 51 aa2.65□□□□□ -1.99
EXT1-203ENST00000437196 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
EXT1-203ENST00000437196 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
EXT1-203ENST00000437196 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
EXT1-203ENST00000437196 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
EXT1-203ENST00000437196 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
EXT1-203ENST00000437196 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 58.2 ms