RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SEMA3A-204ENST00000436949 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
SEMA3A-204ENST00000436949 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SEMA3A-204ENST00000436949 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
SEMA3A-204ENST00000436949 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
SEMA3A-204ENST00000436949 KMT2DO14686 5537 aa2.54□□□□□ -2
SEMA3A-204ENST00000436949 KRTAP5-9P26371 169 aa2.53□□□□□ -2
SEMA3A-204ENST00000436949 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
SEMA3A-204ENST00000436949 LCE3BQ5TA77 95 aa2.53□□□□□ -2.01
SEMA3A-204ENST00000436949 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
SEMA3A-204ENST00000436949 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
SEMA3A-204ENST00000436949 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
SEMA3A-204ENST00000436949 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
SEMA3A-204ENST00000436949 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
SEMA3A-204ENST00000436949 INE1O15225 51 aa2.48□□□□□ -2.01
SEMA3A-204ENST00000436949 LCE5AQ5TCM9 118 aa2.48□□□□□ -2.01
SEMA3A-204ENST00000436949 LCE3CQ5T5A8 94 aa2.46□□□□□ -2.02
SEMA3A-204ENST00000436949 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
SEMA3A-204ENST00000436949 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
SEMA3A-204ENST00000436949 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
SEMA3A-204ENST00000436949 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
SEMA3A-204ENST00000436949 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
SEMA3A-204ENST00000436949 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
SEMA3A-204ENST00000436949 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
SEMA3A-204ENST00000436949 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
SEMA3A-204ENST00000436949 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
SEMA3A-204ENST00000436949 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
SEMA3A-204ENST00000436949 SPRR2EP22531 72 aa2.33□□□□□ -2.04
SEMA3A-204ENST00000436949 SPRR2BP35325 72 aa2.33□□□□□ -2.04
SEMA3A-204ENST00000436949 SPRR2AP35326 72 aa2.33□□□□□ -2.04
SEMA3A-204ENST00000436949 LCE1AQ5T7P2 110 aa2.3□□□□□ -2.04
SEMA3A-204ENST00000436949 MT1LQ93083 61 aa2.28□□□□□ -2.04
SEMA3A-204ENST00000436949 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
SEMA3A-204ENST00000436949 MT1EP04732 61 aa2.27□□□□□ -2.05
SEMA3A-204ENST00000436949 SPRR2DP22532 72 aa2.27□□□□□ -2.05
SEMA3A-204ENST00000436949 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
SEMA3A-204ENST00000436949 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
SEMA3A-204ENST00000436949 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SEMA3A-204ENST00000436949 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
SEMA3A-204ENST00000436949 MT1GP13640 62 aa2.19□□□□□ -2.06
SEMA3A-204ENST00000436949 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
SEMA3A-204ENST00000436949 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
SEMA3A-204ENST00000436949 MT3P25713 68 aa2.15□□□□□ -2.06
SEMA3A-204ENST00000436949 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
SEMA3A-204ENST00000436949 MT1MQ8N339 61 aa2.11□□□□□ -2.07
SEMA3A-204ENST00000436949 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-204ENST00000436949 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SEMA3A-204ENST00000436949 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
SEMA3A-204ENST00000436949 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
SEMA3A-204ENST00000436949 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
SEMA3A-204ENST00000436949 LCE1FQ5T754 118 aa2.03□□□□□ -2.09
SEMA3A-204ENST00000436949 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
SEMA3A-204ENST00000436949 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
SEMA3A-204ENST00000436949 MT4P47944 62 aa1.93□□□□□ -2.1
SEMA3A-204ENST00000436949 OBSCNQ5VST9 7968 aa1.92□□□□□ -2.1
SEMA3A-204ENST00000436949 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
SEMA3A-204ENST00000436949 MT1AP04731 61 aa1.9□□□□□ -2.11
SEMA3A-204ENST00000436949 KRTAP5-5Q701N2 237 aaPredicted RBP1.89□□□□□ -2.11
SEMA3A-204ENST00000436949 PRM1P04553 51 aa1.88□□□□□ -2.11
SEMA3A-204ENST00000436949 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
SEMA3A-204ENST00000436949 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
SEMA3A-204ENST00000436949 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
SEMA3A-204ENST00000436949 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
SEMA3A-204ENST00000436949 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
SEMA3A-204ENST00000436949 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
SEMA3A-204ENST00000436949 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SEMA3A-204ENST00000436949 LCE1EQ5T753 118 aa1.58□□□□□ -2.16
SEMA3A-204ENST00000436949 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.17
SEMA3A-204ENST00000436949 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
SEMA3A-204ENST00000436949 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
SEMA3A-204ENST00000436949 KRTAP4-4Q9BYR3 166 aa1.35□□□□□ -2.19
SEMA3A-204ENST00000436949 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
SEMA3A-204ENST00000436949 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SEMA3A-204ENST00000436949 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SEMA3A-204ENST00000436949 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
SEMA3A-204ENST00000436949 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SEMA3A-204ENST00000436949 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 86 ms