RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
CTDSPL-204ENST00000435525 NEBP20929 6669 aa5.97□□□□□ -1.45
CTDSPL-204ENST00000435525 SPRR2DP22532 72 aa5.96□□□□□ -1.46
CTDSPL-204ENST00000435525 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
CTDSPL-204ENST00000435525 MT1GP13640 62 aa5.91□□□□□ -1.46
CTDSPL-204ENST00000435525 MT1LQ93083 61 aa5.9□□□□□ -1.46
CTDSPL-204ENST00000435525 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
CTDSPL-204ENST00000435525 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
CTDSPL-204ENST00000435525 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
CTDSPL-204ENST00000435525 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
CTDSPL-204ENST00000435525 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
CTDSPL-204ENST00000435525 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CTDSPL-204ENST00000435525 MT1MQ8N339 61 aa5.77□□□□□ -1.49
CTDSPL-204ENST00000435525 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
CTDSPL-204ENST00000435525 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
CTDSPL-204ENST00000435525 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
CTDSPL-204ENST00000435525 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
CTDSPL-204ENST00000435525 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
CTDSPL-204ENST00000435525 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
CTDSPL-204ENST00000435525 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
CTDSPL-204ENST00000435525 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
CTDSPL-204ENST00000435525 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
CTDSPL-204ENST00000435525 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
CTDSPL-204ENST00000435525 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
CTDSPL-204ENST00000435525 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
CTDSPL-204ENST00000435525 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
CTDSPL-204ENST00000435525 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
CTDSPL-204ENST00000435525 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
CTDSPL-204ENST00000435525 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
CTDSPL-204ENST00000435525 MT4P47944 62 aa5.14□□□□□ -1.59
CTDSPL-204ENST00000435525 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
CTDSPL-204ENST00000435525 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
CTDSPL-204ENST00000435525 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
CTDSPL-204ENST00000435525 MT1AP04731 61 aa5.05□□□□□ -1.6
CTDSPL-204ENST00000435525 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
CTDSPL-204ENST00000435525 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
CTDSPL-204ENST00000435525 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
CTDSPL-204ENST00000435525 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.63
CTDSPL-204ENST00000435525 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
CTDSPL-204ENST00000435525 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CTDSPL-204ENST00000435525 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CTDSPL-204ENST00000435525 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
CTDSPL-204ENST00000435525 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
CTDSPL-204ENST00000435525 MT3P25713 68 aa4.65□□□□□ -1.67
CTDSPL-204ENST00000435525 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
CTDSPL-204ENST00000435525 AHNAK2Q8IVF2 5795 aa4.52□□□□□ -1.69
CTDSPL-204ENST00000435525 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
CTDSPL-204ENST00000435525 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
CTDSPL-204ENST00000435525 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
CTDSPL-204ENST00000435525 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
CTDSPL-204ENST00000435525 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
CTDSPL-204ENST00000435525 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
CTDSPL-204ENST00000435525 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
CTDSPL-204ENST00000435525 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CTDSPL-204ENST00000435525 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CTDSPL-204ENST00000435525 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
CTDSPL-204ENST00000435525 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CTDSPL-204ENST00000435525 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
CTDSPL-204ENST00000435525 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
CTDSPL-204ENST00000435525 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
CTDSPL-204ENST00000435525 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
CTDSPL-204ENST00000435525 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
CTDSPL-204ENST00000435525 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CTDSPL-204ENST00000435525 MUC5BQ9HC84 5762 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-204ENST00000435525 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
CTDSPL-204ENST00000435525 INE1O15225 51 aa3.58□□□□□ -1.84
CTDSPL-204ENST00000435525 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-204ENST00000435525 H3BS24 57 aa3.48□□□□□ -1.85
CTDSPL-204ENST00000435525 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CTDSPL-204ENST00000435525 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CTDSPL-204ENST00000435525 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CTDSPL-204ENST00000435525 PRM1P04553 51 aa3.23□□□□□ -1.89
CTDSPL-204ENST00000435525 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
CTDSPL-204ENST00000435525 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CTDSPL-204ENST00000435525 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
CTDSPL-204ENST00000435525 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CTDSPL-204ENST00000435525 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
CTDSPL-204ENST00000435525 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms