RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
GARNL3-205ENST00000435213 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
GARNL3-205ENST00000435213 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
GARNL3-205ENST00000435213 KRTAP9-6A0A140TA67 174 aa2.48□□□□□ -2.01
GARNL3-205ENST00000435213 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
GARNL3-205ENST00000435213 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
GARNL3-205ENST00000435213 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
GARNL3-205ENST00000435213 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
GARNL3-205ENST00000435213 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
GARNL3-205ENST00000435213 KRTAP4-8Q9BYQ9 185 aa2.39□□□□□ -2.03
GARNL3-205ENST00000435213 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
GARNL3-205ENST00000435213 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
GARNL3-205ENST00000435213 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
GARNL3-205ENST00000435213 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
GARNL3-205ENST00000435213 MT1LQ93083 61 aa2.36□□□□□ -2.03
GARNL3-205ENST00000435213 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
GARNL3-205ENST00000435213 MT1EP04732 61 aa2.34□□□□□ -2.04
GARNL3-205ENST00000435213 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
GARNL3-205ENST00000435213 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
GARNL3-205ENST00000435213 KRTAP9-7A8MTY7 169 aa2.28□□□□□ -2.04
GARNL3-205ENST00000435213 PRM1P04553 51 aa2.28□□□□□ -2.04
GARNL3-205ENST00000435213 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
GARNL3-205ENST00000435213 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
GARNL3-205ENST00000435213 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
GARNL3-205ENST00000435213 SPRR2EP22531 72 aa2.2□□□□□ -2.06
GARNL3-205ENST00000435213 SPRR2BP35325 72 aa2.2□□□□□ -2.06
GARNL3-205ENST00000435213 SPRR2AP35326 72 aa2.2□□□□□ -2.06
GARNL3-205ENST00000435213 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
GARNL3-205ENST00000435213 MT1GP13640 62 aa2.19□□□□□ -2.06
GARNL3-205ENST00000435213 MT1MQ8N339 61 aa2.17□□□□□ -2.06
GARNL3-205ENST00000435213 KRTAP9-9Q9BYP9 154 aa2.17□□□□□ -2.06
GARNL3-205ENST00000435213 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
GARNL3-205ENST00000435213 SYNE1Q8NF91 8797 aaKnown RBP2.17□□□□□ -2.06
GARNL3-205ENST00000435213 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.06
GARNL3-205ENST00000435213 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.06
GARNL3-205ENST00000435213 KRTAP5-9P26371 169 aa2.15□□□□□ -2.07
GARNL3-205ENST00000435213 NEBP20929 6669 aa2.13□□□□□ -2.07
GARNL3-205ENST00000435213 LCE4AQ5TA78 99 aa2.13□□□□□ -2.07
GARNL3-205ENST00000435213 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
GARNL3-205ENST00000435213 MT1AP04731 61 aa2.11□□□□□ -2.07
GARNL3-205ENST00000435213 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
GARNL3-205ENST00000435213 SPRR2DP22532 72 aa2.1□□□□□ -2.07
GARNL3-205ENST00000435213 LCE3BQ5TA77 95 aa2.07□□□□□ -2.08
GARNL3-205ENST00000435213 MT3P25713 68 aa2.03□□□□□ -2.08
GARNL3-205ENST00000435213 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
GARNL3-205ENST00000435213 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
GARNL3-205ENST00000435213 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
GARNL3-205ENST00000435213 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
GARNL3-205ENST00000435213 MT4P47944 62 aa1.96□□□□□ -2.1
GARNL3-205ENST00000435213 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
GARNL3-205ENST00000435213 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
GARNL3-205ENST00000435213 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
GARNL3-205ENST00000435213 KRTAP4-6Q9BYQ5 205 aa1.82□□□□□ -2.12
GARNL3-205ENST00000435213 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
GARNL3-205ENST00000435213 KRTAP5-2Q701N4 177 aa1.7□□□□□ -2.14
GARNL3-205ENST00000435213 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.14
GARNL3-205ENST00000435213 KRTAP4-11Q9BYQ6 195 aa1.64□□□□□ -2.15
GARNL3-205ENST00000435213 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
GARNL3-205ENST00000435213 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
GARNL3-205ENST00000435213 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
GARNL3-205ENST00000435213 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
GARNL3-205ENST00000435213 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
GARNL3-205ENST00000435213 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
GARNL3-205ENST00000435213 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
GARNL3-205ENST00000435213 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
GARNL3-205ENST00000435213 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
GARNL3-205ENST00000435213 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
GARNL3-205ENST00000435213 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
GARNL3-205ENST00000435213 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
GARNL3-205ENST00000435213 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.38□□□□□ -2.19
GARNL3-205ENST00000435213 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
GARNL3-205ENST00000435213 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
GARNL3-205ENST00000435213 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
GARNL3-205ENST00000435213 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
GARNL3-205ENST00000435213 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
GARNL3-205ENST00000435213 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
GARNL3-205ENST00000435213 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 103.4 ms